Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score = 57.4 bits (137), Expect = 4e-12
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 9/113 (7%)

Query: 442 DELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTLF- 500
           ++   VL NLL NAF+ T   P+  + I++ L D G ++++ V+DNG GI   +   +F 
Sbjct: 328 EKFRRVLLNLLSNAFKFT---PNQGE-ITVSLIDRGDDVILRVSDNGPGIPESMWTAVFE 383

Query: 501 ----LKGVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIPNR 549
               + G S +   G G+GL +V +FV    G + I  A   G  F++ +P +
Sbjct: 384 RFRQVDGGSDRRHGGTGLGLAIVREFVDLHGGEVSIGQASEGGAAFTVVLPKK 436



 Score = 30.0 bits (66), Expect = 6e-04
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 217 EEIAMNLNLQQSILQSVYEGIVAISLKGEILSVNAKALNILGIAHQPTHLIGRNVQ 272
           +E  + L L  ++  +  EGI    LKG IL+VN     I    ++   ++GRN +
Sbjct: 743 KEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQI--TLYEAAEVLGRNAR 796