Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 707 a.a., response regulator from Rhodopseudomonas palustris CGA009

 Score = 59.7 bits (143), Expect = 4e-13
 Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 53/239 (22%)

Query: 356 MSHEFANRLSTIGGLIQ-----------IGAYDEAVKTIRRETAEQQQLIDFIAQTFHPK 404
           ++H+F N L  +GG +Q           I ++D     + + TA  +QL+ F  +  H  
Sbjct: 347 VAHDFNNLLMVVGGSVQRLRRRHSDLQDIRSFDMIDSAVAKGTALTRQLLSFSRR--HNV 404

Query: 405 VIAGLLLG----------KYSRAKELGLCLEFDPLSHLHQEPQCMTSD--ELAAVLGNLL 452
               + LG          + S   ++G+ +  DP +    EP  +  D  E    L NL 
Sbjct: 405 AAKAVDLGDAVTKFADVLRQSVRSDIGIMI--DPPA----EPVVVMIDPNEFEIALLNLA 458

Query: 453 DNAFEA--------------TLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQT 498
            NA +A              TLKN    K         G   ++  AD G+GI  DI + 
Sbjct: 459 LNARDAMPDGGRITISIRTETLKNFGPRKL-------TGTYAILSFADTGVGIPDDIRER 511

Query: 499 LFLKGVSSKNQE-GHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIPNRPKTLAAE 556
           +F    ++K  + G G+GL  ++ FV Q+ G+I +DS   +GT F +F+P   +TL  +
Sbjct: 512 IFEPFFTTKPVDRGTGLGLSQIYGFVQQSSGAITVDSDLGRGTRFDLFLPLSAETLGLD 570