Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 75/341 (21%), Positives = 145/341 (42%), Gaps = 33/341 (9%)

Query: 228 SILQSVYEGIVAISLKGEILSVNAKALNILGIAHQPTHLIGRNVQEFITPTCFFMGASPF 287
           SI+ S  + IV+  L G + S N  A  I G   +   +IG ++ + I            
Sbjct: 47  SIISSSDDAIVSKDLNGIVTSWNNAAARIFGYTAE--EMIGSSILKVIPIDRHEEEPKIL 104

Query: 288 GKLAQQNRVSQQDELISCNGETLVANRVPINSGQQQIGWVVSFRRRNDFNTLTSQLTQIR 347
            +L + +RV   + +      TL+   + I+  +   G V+   +      +T +    +
Sbjct: 105 SQLRKGDRVDHFETIRRKKDGTLIHVSLTISPIKDSSGQVIGLSKIA--RDITEKKLVEK 162

Query: 348 QHNDNLRVMSHEFANRLSTIGGLIQIGAY-------DEAVKTIRRETAEQQQLIDFIAQT 400
           + ++ +  +SHE    L+++   IQI  +       D     + +   + +++ + I   
Sbjct: 163 KKDEFISFVSHELKTPLTSLRSYIQIALHKLKLNGNDFIAHALTKAEQQTKKMENMITDF 222

Query: 401 FHPKVIAGLLL----GKYSRAKELGLCLE-FDPLSHLHQ-----EPQCMT---SDELAAV 447
            H   + G  L     ++     +  C+E  +  S  HQ     E + M    +++++ V
Sbjct: 223 LHISRLEGGQLKFESARFDLVATIRSCIEDAEASSEKHQLVYEGENEAMVMGDAEKISLV 282

Query: 448 LGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTLF-----LK 502
           + NLL NA     K       I++    +   L+I V D GIGIS++  + +F     ++
Sbjct: 283 MTNLLSNA----QKYSPDGGIITVSCKRSDQNLIISVKDQGIGISSEDKKNMFQKFYRIR 338

Query: 503 GVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFS 543
              ++N  G GIGLYL    ++    SI ++S   +G+ FS
Sbjct: 339 SEKTRNISGFGIGLYLSSSIISLHGSSISVESKLDEGSTFS 379