Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 58.5 bits (140), Expect = 6e-13
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 443 ELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTLFLK 502
           +L  +LGNLLDNA +A       NK +  +  DNG +L+I V D+G G+S +  Q +  +
Sbjct: 379 DLTEMLGNLLDNACKAA-----RNKVMLSVDADNG-KLIISVEDDGAGVSPEQRQLILER 432

Query: 503 GVSSKNQE-GHGIGLYLVHQFVTQAHGSILIDSAEPQG 539
           G  +   E GHGIGL +V   V    G + IDS+   G
Sbjct: 433 GRRADTYEKGHGIGLAIVGDLVQSYQGELTIDSSATLG 470