Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 35/259 (13%)

Query: 299 QDELISCNGETLVANRVPINSGQQQIGWVVSFRRRNDF-NTLTSQLTQIRQHNDNLRVMS 357
           +D  +   G T   N++ + S  QQ  +  +    ND  ++L ++L  +    D+  +  
Sbjct: 215 EDYPVELEGVTQALNQLLVQSSAQQERYQNAM---NDLAHSLKTRLAAVHAITDDQTLSK 271

Query: 358 HEFANRL-STIGGLIQIGAYDEAVKTIRRETAEQQQ-----LIDFIAQTFHPKVIAGLLL 411
              + ++   +  + Q+  Y      + R+  +Q+Q     LID ++Q          +L
Sbjct: 272 SGASEKIMEQVSQMDQLVKYQLKRAMLGRKGLKQEQTLVAPLIDQLSQ----------ML 321

Query: 412 GKYSRAKELGLCLEFDPLSHLHQEPQCMTSD--ELAAVLGNLLDNAFEATLKNPHSNKTI 469
            K  R K++    +         + Q    D  +L  + GNL++NAF+  +    S   +
Sbjct: 322 FKVYRDKQIQFSADIP-------DDQVFPGDKGDLMELCGNLMENAFKLCI----SKVAV 370

Query: 470 SLLLTDNGAELVIEVADNGIGISADIAQTLFLKGVSSKNQE-GHGIGLYLVHQFVTQAHG 528
           +    DN +E ++ V D+G G+   I Q +  +GV +  Q+ G GIGL + ++ V+  +G
Sbjct: 371 TARYGDN-SEFILIVEDDGPGVPEAIRQRIIERGVRADTQKAGQGIGLAVCNEIVSSYNG 429

Query: 529 SILIDSAEPQGTIFSIFIP 547
           S+ ID++  +G  F+I IP
Sbjct: 430 SLSIDTSSLEGARFTIKIP 448