Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 126/562 (22%), Positives = 227/562 (40%), Gaps = 56/562 (9%)

Query: 27  LVAMVVIQLSLVAGFFHQTLSETLQDQ---------ISTKALIQAREIATDPNLIVLIQQ 77
           ++ +V I LSL+      T  +TL+ Q         +++++++QA E +    L V    
Sbjct: 17  VLTLVTIGLSLIV-----TTGQTLRQQEEAGTQYLTMTSRSVLQAVESSLRRGLFVRPTG 71

Query: 78  NRL-AEVQAKIDR-LQRISDANFIVIGDANGIRI--AHPDEQKIGLPMQGGDSRRALKEG 133
             L +   A+  R L++  D  F+ + D NG R+  + P ++   L       ++  ++G
Sbjct: 72  PGLFSPGTAEFFRELEQTGDVLFVGVIDRNGGRVLSSRPAQEAGPLAFPPEALQQLAQKG 131

Query: 134 EYYTSTQKGSLGWAIRGKAAI-----VAPSGEILGVVSVGYLLDNISSWLRVYSYPVIFT 188
           E+Y     G+    + GK  +          E+   + VG    +++  L VY+      
Sbjct: 132 EWYGRATFGARQTYVYGKRIVPGRGLAQDEDELPTFLVVGL---DMTKHLGVYNRFRQNA 188

Query: 189 VLLLMLLSALGAWIFTRHIKQQMFNMEPEEIAMNLNLQQSILQSVYEGIVAISLKGEILS 248
           +     + A   +I+T  +       +    A+    Q  +L ++ +G++ +S    I +
Sbjct: 189 LFQAAYILAAAVFIWTLAMSFLKRREQAGRAAVLERFQARLLDNLPDGLITVSRSDTISA 248

Query: 249 VNAKALNILGIAHQPTHLIGRNVQEF----ITPTCFFMGASPFGKLAQQNRVSQQDELIS 304
            N  A  ILGIA  P  L G ++ E     + P       +  G  A+    + +    S
Sbjct: 249 ANPAAHGILGIA--PGRLAGMSIAELPEGIVAPVA---RVAEGGSSAEPEAAAGRWFTRS 303

Query: 305 CNGETLVANRVPINSGQQQIGWVVSFRRRNDFNTLTSQLTQIRQH---NDNLRVMSHEFA 361
             G  L    +PI  G      +V  R R     L   L++  +          ++HE  
Sbjct: 304 VGGAHLEVLTLPIRQGDDDHDRLVIIRDRTQIRELEKNLSEAEKLAALGTLAAGVAHEIR 363

Query: 362 NRLSTIGGLIQIGAY-------DEA-VKTIRRETAEQQQLIDFIAQTFHPKVIAGLLLGK 413
           N LS + G  Q  A        DE   +T+ RE     ++I  +     P+ +    +  
Sbjct: 364 NPLSALRGFAQYFAKKLVGRQPDETYAQTMVREADRLNRVITDLLYLSRPRAMDARAVSL 423

Query: 414 YSRAKELGLCLEFDPLSH-----LHQEPQCMTSDELA---AVLGNLLDNAFEATLKNPHS 465
                ++G  + FD         +   P  + +DE A   AVL NL+ N+ +A       
Sbjct: 424 GQLVADIGNLVRFDLEKRNIALKVSLGPDIVWADEDALKQAVL-NLVLNSIDALEGLATG 482

Query: 466 NKTISLLLTDNGAELVIEVADNGIGISADIAQTLFLKGVSSKNQEGHGIGLYLVHQFVTQ 525
            + I +          + V D+G G+SA   +  F    ++K ++G G+GL LVH+ + +
Sbjct: 483 EREIHVSSAQGDGGTWVFVGDSGPGMSALQREQAFEPFFTTK-KKGTGLGLALVHKTMRE 541

Query: 526 AHGSILIDSAEPQGTIFSIFIP 547
             G   IDS   +GT  S+F P
Sbjct: 542 HDGRAQIDSEMGRGTTVSLFFP 563