Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 767 a.a., multi-sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 61.2 bits (147), Expect = 1e-13
 Identities = 95/390 (24%), Positives = 166/390 (42%), Gaps = 61/390 (15%)

Query: 204 TRHIKQQMFNM--EPEEIAMNLNLQQSILQSVYEGIVAISLKGEILSVNAKALNILGIAH 261
           TR +K Q   +     +I     L  S+L SV  G++ +  +G +  +N  A  +L +  
Sbjct: 369 TRQLKAQREALLENTNQIERRRRLFDSVLGSVTAGVIGLDSRGRVDFMNRSATAMLAL-- 426

Query: 262 QPTHLIGRNVQEFITPTCFFMGASPFGKLAQQNR-VSQQDELISCNGET---LVANRVPI 317
               + GR + E +           F KL    R V+QQ   ++  G     LV     +
Sbjct: 427 DGVTVSGRGIDEVVPEF-----EDLFDKLQGGLRDVAQQQVSLTRQGRQESLLVRIAKRL 481

Query: 318 NSGQQQIGWVVSFRRRNDFNTLTSQLTQIRQHNDNLRVMSHEFANRLSTIGGLIQ----- 372
           N   +  G+VV+F    D  T      ++    D  R ++HE  N L+ I    +     
Sbjct: 482 NREDRLEGYVVAFDDVTDLATAQ----RMAAWGDVARRIAHEIKNPLTPIQLSAERMKRK 537

Query: 373 ----IG----AYDEAVKTIRRETAEQQQLIDFIA--------QTFH---PKVIAGLLLGK 413
               +G    A  E    I R+TA+ ++++D  +        +T H    +++   +L +
Sbjct: 538 FGPRLGEDGPALVELSDVIIRQTADLRRIVDEFSKFARMPEPETAHLDLAQLVRDAVLLQ 597

Query: 414 YSRAKELGLCLEFDPLSHLHQEPQCMTSDELAAVLGNLLDNAFEATLKNPHSNKT----- 468
                ++    +  P       P  + +  +   L NLL NA EA +++  + KT     
Sbjct: 598 QVAQPDVTFVTDISP----DPVPADLDATLMGQALTNLLKNAGEA-IESRQTGKTGDTRP 652

Query: 469 --ISLLLTDNGAELVIEVADNGIGISADIAQTLFLKGVSSKNQEGHGIGLYLVHQFVTQA 526
             I + L + G E  + +ADNGIG+  D A+ LF   V++++ +G G+GL +V + V + 
Sbjct: 653 GEIRVSLRNLGREAELTIADNGIGLPPDTAK-LFEPYVTTRD-KGTGLGLPIVRKIVEEH 710

Query: 527 HGSILIDSAE------PQGTIFSIFIPNRP 550
            G++ +  AE      P G    I +P RP
Sbjct: 711 QGTLELRPAEPFTPDTPPGAAAVILLPTRP 740