Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 62.4 bits (150), Expect = 7e-14
 Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 21/218 (9%)

Query: 336 FNTLTSQLTQIRQHNDNLRVMSHEFANRLSTIGGLIQIGAYDEAVKTIRRETAEQQQLID 395
           +  L S+LT+  +    L  M     + L  +  L+     D     + R      QL +
Sbjct: 295 YTELLSRLTEDERQRFYLDNMKSSSEHLLKLVSDLLDFHRLDLNKAEVNRIVFNPAQLFE 354

Query: 396 FIAQTFHPKVIAGLLLGKYSRAKELGLCLEFDPLSHLHQEPQCMTSDELAAVLGNLLDNA 455
            I   F P   A  L+ +   A EL      DPL              +  ++ NLL NA
Sbjct: 355 EIRVCFEPLTAAKGLVLQCHIAPELSEKYISDPL-------------RIQQIVNNLLSNA 401

Query: 456 FEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTLFLKGV---SSKNQEGH 512
            + T +       I+L +  N ++L I VAD G G++++  + +F +      ++ +EG 
Sbjct: 402 VKFTQQGK-----ITLTVGYNASKLTIAVADTGKGMASEDRERIFQEFTRLPGAQGEEGF 456

Query: 513 GIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIPNRP 550
           G+GL +VH+ V    G+I + S   +G+ F++ +P  P
Sbjct: 457 GLGLSIVHKLVLLLEGTIDVQSTLGKGSCFTVVLPLFP 494