Pairwise Alignments

Query, 227 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., two-component system response regulator DcuR from Rahnella sp. WP5

 Score =  107 bits (266), Expect = 3e-28
 Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 5/226 (2%)

Query: 4   LIDVLIVEDETSIADVHSFYLKQTARFRPVGVAQSINEARNMV--RILKPKLIFLDNYLP 61
           +I+VLIV+D+  +A+++  Y+ Q   F   G A ++ +A+++V    L   LI LD Y+ 
Sbjct: 1   MINVLIVDDDAMVAELNRCYVGQIDGFACCGTASTLQQAKDLVLNSELSIDLILLDVYMQ 60

Query: 62  DGRGIEFLKELTHQPQAPDVIFITAASDMETVREAVRCGVFDYLLKPIAYDRVQNSLERY 121
              G++ L EL +  +  DVI I++A+D ET+++++  GV DYL+KP  + R + +L  +
Sbjct: 61  QDNGLDLLPELRNARRPVDVIVISSAADAETIKKSLNYGVVDYLIKPFQFSRFEEALTGW 120

Query: 122 LKYISSLRANDSVNQRHVDELF--NFQAKTDQLDGLPKGIDELTLIKIQEIYHHEPQAAY 179
            +  + +       Q  VD L   N  A  D    LPKG+   TL  + +     P   +
Sbjct: 121 QQKKTLMDNQQYYEQSDVDRLIHGNNTAAAD-TKKLPKGLTLQTLRTLCQWIDAHPTMEF 179

Query: 180 TAELLGQAIGISKTTARRYLEYCVASGFLEACIQHGRVGRPERLYQ 225
           + + L  ++ IS+ + R+YL +      L   I +G  GRP   Y+
Sbjct: 180 STDELATSVNISRVSCRKYLIWLAQMNILFTSIHYGVTGRPVYRYR 225