Pairwise Alignments

Query, 227 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 14/124 (11%)

Query: 7   VLIVEDETSIADVHSFYLKQTARFRPVGV------AQSINEARNMVRILKPKLIFLDNYL 60
           +L+V+DE  +  +    L + A    VG+      A +++E   +     P +++LD  L
Sbjct: 4   ILVVDDEAMVRTM----LAEVA----VGMGHEALTAATLDEGLRLAATGAPDVVYLDVLL 55

Query: 61  PDGRGIEFLKELTHQPQAPDVIFITAASDMETVREAVRCGVFDYLLKPIAYDRVQNSLER 120
           PDG G+  +      P AP++I +T   D +    A+R GV++YL KP+    +  SL R
Sbjct: 56  PDGNGLAHVTTFGRLPCAPEIIVVTGFGDADGAETALRHGVWEYLQKPLRVQDITLSLSR 115

Query: 121 YLKY 124
            L Y
Sbjct: 116 VLAY 119