Pairwise Alignments

Query, 227 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 4/132 (3%)

Query: 7   VLIVEDETSIADVHSFYLKQTARFRPVGVAQSINEARNMVRILKPKLIFLDNYLPDGRGI 66
           VL V+DE SI  +    L    R   V VA S  +AR  +R    +++ LD  LPD  GI
Sbjct: 7   VLAVDDEPSIGKLLEKELSTPTR--TVHVATSARQARERLRRATYEVVVLDIRLPDADGI 64

Query: 67  EFLKELTHQPQAPDVIFITAASDMETVREAVRCGVFDYLLKPIAYDRVQNSLERYLKYIS 126
           EF+ EL  +    +VI IT   +++   EA++ G +DY+ KP     ++  +ER   Y  
Sbjct: 65  EFMVELRQRYPDTEVILITGHGNIDNAVEAMKLGAYDYITKPFNLTELEVVVER--AYQR 122

Query: 127 SLRANDSVNQRH 138
           +   N++   RH
Sbjct: 123 AFLRNENRALRH 134