Pairwise Alignments

Query, 227 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., sigma-54 dependent response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 61.2 bits (147), Expect = 3e-14
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 4/120 (3%)

Query: 5   IDVLIVEDETSIADVHSFYLKQTAR-FRPVGVAQSINEARNMVRILKPKLIFLDNYLPDG 63
           + VLIV+DE  +    SF  K  ++ F  V  A SI +A  +       L+ +D  LP  
Sbjct: 15  VSVLIVDDEPGM---RSFLNKALSKKFALVETAGSIEDAEQLRSRCHFDLLIVDIRLPGR 71

Query: 64  RGIEFLKELTHQPQAPDVIFITAASDMETVREAVRCGVFDYLLKPIAYDRVQNSLERYLK 123
            GIE+ + L  Q +  DVIF+T  +D+E   +A+R G  D+++KP   +++ ++++R ++
Sbjct: 72  SGIEWSEALDEQGRRSDVIFMTGYADLEVAIKALRAGASDFIMKPFHLEQMMSAVDRCIE 131