Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  115 bits (287), Expect = 2e-30
 Identities = 87/300 (29%), Positives = 139/300 (46%), Gaps = 19/300 (6%)

Query: 1   MLKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVR 60
           M     + +L  F   A+  SF  AA  L+++  AIS Q+  LEA LG  LFER S+ VR
Sbjct: 1   MFAKLPLTALRGFESAARLGSFKAAAQELNVSPAAISHQVKSLEAFLGVRLFERSSQNVR 60

Query: 61  LTEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHP 120
           L+  G  L   + R+  DI+  +  L P    + + +  TP+FA  WL+PRL DF+R +P
Sbjct: 61  LSADGERLHPYMYRALLDIQHGLQVLSPPCAAQSLVVSTTPAFASLWLIPRLGDFHRLYP 120

Query: 121 EIQIQTFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQ 180
           EI ++      +VD +R   D +ID       R D QL  +    P++  ++     + +
Sbjct: 121 EIDVRLHTSNDVVDLQR---DASIDLAIRALFRPDPQLFEQ----PLLDEHF---GVYCR 170

Query: 181 EDWANSEAWQQVVLLHDAMPWANAAR-DQEWHYWAHQMGIT--LPERRDHYFNRTDMAMS 237
             W    A   V L+   +PW ++A    +W  W  + G    L   R   ++    A+ 
Sbjct: 171 PGWQPPAAGSPVELID--VPWLSSANVAVDWPAWCAKAGTLGWLENARFRRYDEEQHALQ 228

Query: 238 AAEAGVGIAMARTALLSNELDTGRLVTPFAPIRAKAGYFLIT----HQATDATQVFCQWL 293
           AA AG G+ +A   L++  +  G LV     +R     + +      +   A + F +WL
Sbjct: 229 AAIAGHGLVLASNVLVAEAVARGELVEYRPEVRLAGARYTVVCVPGRERQAAVRGFSEWL 288