Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., Glycine cleavage system transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  138 bits (347), Expect = 2e-37
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 23/304 (7%)

Query: 1   MLKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVR 60
           M +   + +LHTF+  AQ  +F+ AA  LH+T GA+S+Q+  LE  LG++LF+R +RG+ 
Sbjct: 1   MKRLPPLPALHTFLITAQCCNFTRAAEQLHITQGAVSRQIAGLEDHLGYALFQRQARGLT 60

Query: 61  LTEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHP 120
           LT  G+  L  VQ+ +  I + +  +    +R+ ++LK  P+   +WL+PRL  + +  P
Sbjct: 61  LTAEGQAWLPRVQQVFSLIGEAVEQV--GEKRQTLQLK-APTCVMRWLLPRLLQWQKERP 117

Query: 121 EIQIQ---TFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHS 177
           ++ ++   T   G  VD +R  +D A+ YG  P        L +E L PV S   L    
Sbjct: 118 DVPVELTTTVRHG--VDFQREAFDAAVVYGPAPDASLACVHLFDEQLTPVCSRPVLEGPV 175

Query: 178 WLQEDWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPE-RRDHYFNRTDMAM 236
            L E        QQ VLLH          +++W+ W     + L    +  +F   D+AM
Sbjct: 176 PLHE----PADLQQHVLLHPTRD------ERDWNAWLKAADVHLSNVSKGQHFETLDLAM 225

Query: 237 SAAEAGVGIAMARTALLSNELDTGRLVTPF-APIRAKAGYFLI---THQATDATQVFCQW 292
           S A  G G+A+   +L+ ++L  GRLV PF   ++   GY L+     +A+   Q    W
Sbjct: 226 SMASQGTGVAIGDWSLIGDDLSAGRLVMPFELKVKTGLGYHLVHPHKPEASGPLQALMGW 285

Query: 293 LQKQ 296
           L +Q
Sbjct: 286 LVEQ 289