Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

 Score =  118 bits (296), Expect = 2e-31
 Identities = 87/295 (29%), Positives = 135/295 (45%), Gaps = 17/295 (5%)

Query: 10  LHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRILL 69
           L  F   A++ SF+ AA  L++T  AIS Q+ +LE +LG  LF R   G+ LT+ G    
Sbjct: 11  LKAFESAARHMSFTKAAQELNVTQTAISHQIRRLEEELGVRLFLRLKDGLALTDEGHAYF 70

Query: 70  TTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTFAE 129
             V+ ++ ++     +L+ S     + +    SFA KWL+PRL  F +  P I ++  A 
Sbjct: 71  PGVRAAFHELRYCTQTLLQSRSNSVLTISTLVSFASKWLLPRLASFQQAFPNIDVRVTAS 130

Query: 130 GALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQEDWANSEAW 189
              V+      D AI YG+  +    A  LM + + PV S   L     L+         
Sbjct: 131 TERVNFREGGVDAAIRYGSGDWKGLRADWLMADEIFPVCSPRLLQGPKVLEN-------- 182

Query: 190 QQVVLLHDAMPWANAARDQEWHYWAHQMG--ITLPERRDHYFNRTDMAMSAAEAGVGIAM 247
            + +  H  +  +   RD +W  W    G    L E     F+   MA+ AA  G+G+ +
Sbjct: 183 PRDLARHTLLQVSGVTRD-DWSAWLSAAGQPKKLAEGSRLTFDLAMMAVQAAVDGLGVCI 241

Query: 248 ARTALLSNELDTGRLVTPFAPIRAKAG---YFLITHQATDA--TQVFCQWLQKQI 297
            R+  + ++L  GRLV PF  +R K+    YF+  H+  D    Q F  WL   +
Sbjct: 242 GRSTYVEDDLKAGRLVAPF-DLRLKSDLGFYFVSPHETADTPKVQAFRTWLMDSL 295