Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

 Score =  119 bits (299), Expect = 7e-32
 Identities = 87/294 (29%), Positives = 134/294 (45%), Gaps = 17/294 (5%)

Query: 9   SLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRIL 68
           ++  F   A++ SFS AA  LH++  A+S+ +  LE +LG  LFER +R   LT  G+  
Sbjct: 10  AVRAFAAAARHQSFSRAAEELHVSHSAVSRHVKLLEERLGVLLFERRTRQSLLTPEGKAF 69

Query: 69  LTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTFA 128
              V  +   I     +L  S  ++++ + + PSFA +WL+PRL DF   HP+I+ +   
Sbjct: 70  YEQVSEALTQIANAATALTRSAAQRKVIINVRPSFAVRWLIPRLPDFVALHPDIKPEVVT 129

Query: 129 EGALVDSERRDYDLAIDYGALPYPRR-DAQLLMEEWLLPVMSTNYLAAHSWLQE-DWANS 186
                D  R  +D+ I  G   +        L+E+ LL V      AA S LQ     N+
Sbjct: 130 STRPPDPSREPFDVVIRRGRAGWSAHVQPTALLEDDLLLV------AAPSLLQSVPLENT 183

Query: 187 EAWQQVVLLHDAMPWANAARDQEWHYWAHQMGIT-LPERRDHYFNRTDMAMSAAEAGVGI 245
               +  LL      +   R  +W  W    GI+ L       F+   + + AA  G+G+
Sbjct: 184 HDLARHTLL------SGKTRSSDWQAWTVHAGISPLHNPPTLQFDHMHLVLQAAVDGLGV 237

Query: 246 AMARTALLSNELDTGRLVTPFAPIRAKAG--YFLITHQATDATQVFCQWLQKQI 297
           A+   +LL  +L  GRL  P   +R      Y+ ++  A    Q F  WL  QI
Sbjct: 238 ALCPASLLGKDLSNGRLTCPLPSLRLPLSRYYYGVSRDAAVDAQFFVDWLFSQI 291