Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., Glycine cleavage system transcriptional activator from Pseudomonas fluorescens FW300-N1B4

 Score =  136 bits (342), Expect = 7e-37
 Identities = 94/284 (33%), Positives = 148/284 (52%), Gaps = 22/284 (7%)

Query: 1   MLKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVR 60
           M +   + +LHTF+  AQ  +F+ AA  LH+T GA+S+Q+  LE  LG+ LF R +RG+ 
Sbjct: 1   MKRLPPLPALHTFLITAQCCNFTRAAEQLHITQGAVSRQIAGLEDHLGYELFIRQARGLS 60

Query: 61  LTEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHP 120
           LT  GR  L  VQ+ +  I++ +  +    +R+ ++LK  P+   +WL+PRL  + R  P
Sbjct: 61  LTAEGREWLPRVQQIFGLIDEAVEQI--GEKRETLQLK-APTCVMRWLLPRLLQWQRERP 117

Query: 121 EIQIQ---TFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHS 177
           ++ ++   T   G  VD  R  +D A+ YG  P     ++ L +E L PV S   L    
Sbjct: 118 DVPVELTTTVKHG--VDFHREQFDAAVMYGTPPDNSLASRHLFDEQLTPVCSRPMLEGPM 175

Query: 178 WLQEDWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPE-RRDHYFNRTDMAM 236
            LQ         QQ +LLH          +++W+ W     I L    +  +F   D+AM
Sbjct: 176 ALQ----TPADLQQHLLLHPTRD------ERDWNAWLKAADIRLSNVGKGQHFETLDLAM 225

Query: 237 SAAEAGVGIAMARTALLSNELDTGRLVTPFAPIRAKAG--YFLI 278
           S A  G G+A+   +L+ ++L  GRLV PF  ++ K G  Y+L+
Sbjct: 226 SMASQGTGVAIGDWSLIGDDLSAGRLVMPF-DLKVKTGLAYYLV 268