Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  114 bits (284), Expect = 4e-30
 Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 23/278 (8%)

Query: 9   SLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRIL 68
           +L  F   A++ SF+ AA +L +T  A+S+ +  LE  LG  LFERH   + LT+AGR+L
Sbjct: 16  ALRAFEVAARFGSFTQAAQSLFITQSAVSRHVKTLEEHLGCQLFERHGSRLALTDAGRLL 75

Query: 69  LTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQ--- 125
              ++  ++ IE     +  + +R  +RLK   +   +WL+  LE F   +P+ ++Q   
Sbjct: 76  AQELKIGFRTIENA--CVAVTRQRGALRLKAPSTLTMRWLLGTLEGFQVANPQSRVQLTS 133

Query: 126 TFAEGALVDSERRDYDLAIDYGALPYPRRDAQL-LMEEWLLPVMSTNYLAAHSWLQEDWA 184
            + +   VD     +D AI  G   +P    ++ L +EWL+PV +   L A  W      
Sbjct: 134 AWMDLDTVDFSSEPFDCAILLGNGSFPADWRRVKLFDEWLVPVCAPELLGALPW------ 187

Query: 185 NSEAWQQVVLLHDAMPWANAARD-QEWHYWAHQMGIT--LPERRDHYFNRTDMAMSAAEA 241
           N++   +V L+H        +RD ++W  W  + G    +  ++   F+  ++ +SAA  
Sbjct: 188 NTQHLAEVELIH-------PSRDCRDWRRWLQRTGRADQVAWQQGKLFDTLELGISAAAQ 240

Query: 242 GVGIAMARTALLSNELDTGRLVTPF-APIRAKAGYFLI 278
           G G+++   AL+  EL  G LV PF   +++   Y+L+
Sbjct: 241 GHGVSIGDLALVGAELQRGSLVLPFQQAVKSGDSYYLV 278