Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  131 bits (329), Expect = 2e-35
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 19/301 (6%)

Query: 2   LKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRL 61
           L S  +  L     V +  S + AA  L +T GA+SQQ+ + EAQLG +LFER  RG+ +
Sbjct: 4   LNSVHLNGLRAAEAVGRLGSLAAAAEELGVTAGAVSQQIAKTEAQLGRTLFERSPRGLVV 63

Query: 62  TEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPE 121
           +++GR LLT +  +++++ + + +     +   + + + P FA +WLV RL+ F   HP+
Sbjct: 64  SDSGRALLTRLSSAFRELAEAV-AQARRRDESVLTVSVAPVFAARWLVYRLDRFAEHHPD 122

Query: 122 IQIQTFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQE 181
           I+++  A   L D E  D DL I  GA  +P   ++LL+E+ + PV S    A  + L+E
Sbjct: 123 IRLRIDATTTLADLETSDVDLGIRVGAGRWPGVRSELLLEQEVFPVCSP---ALAAGLRE 179

Query: 182 DWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPERRDHYFNRTDMAMSAAEA 241
             A+      V+  H    W      + W   A   G  +  R  H FN   +A+ AA A
Sbjct: 180 P-ADILKLPAVIDAHAMFSW------ELWLKTAGLSGAAMTVR--HTFNDASLALDAAIA 230

Query: 242 GVGIAMARTALLSNELDTGRLVTPFAPIRAKAG---YFL--ITHQATDATQVFCQWLQKQ 296
           G G+ +A   L    L  G LV PF  IRAK G   YF+  ++ + +     F +W++++
Sbjct: 231 GQGVMLAWQTLAGYALLRGSLVAPFG-IRAKTGFGHYFVTSVSRRESKGAAAFKRWVREE 289

Query: 297 I 297
           +
Sbjct: 290 V 290