Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., transcriptional regulator GcvA from Rahnella sp. WP5

 Score =  127 bits (319), Expect = 3e-34
 Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 16/290 (5%)

Query: 9   SLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRIL 68
           SL  F   A++ SF+ AA  L +T  A+S Q+  LE  LG  LF R +R + L+E G+  
Sbjct: 10  SLRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLSEEGQSY 69

Query: 69  LTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTFA 128
              ++  +  + +    L   + +  + + L PSFA +WLVPRL  F   +P I ++  A
Sbjct: 70  YLDIKEIFSALNEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSGFNSAYPGIDVRIQA 129

Query: 129 EGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQEDWANSEA 188
                D    D D+AI +G   +P   A+ L  E+LLPV S + L   + L+E    S  
Sbjct: 130 VDREEDKLADDVDVAIFHGRGNWPGLRAERLYAEYLLPVCSPSLLMGDNPLKEPADLSHH 189

Query: 189 WQQVVLLHDAMPWANAARDQEWHYWAHQMGI-TLPERRDHYFNRTDMAMSAAEAGVGIAM 247
                LLHD       A  ++W  +  Q+G+  +  ++   F+ + M + AA  G GIA+
Sbjct: 190 ----TLLHD-------ASRRDWLAYTKQLGLQQVNVQQGPIFSHSAMVVQAAVHGQGIAL 238

Query: 248 ARTALLSNELDTGRLVTPFAPIR-AKAGYFLITHQA---TDATQVFCQWL 293
               +   E++ GRLV PF+ +  +K  ++L+ H +         F QW+
Sbjct: 239 VNNVMAQTEIEAGRLVCPFSEVLISKNAFYLVCHDSQAELGKIAAFRQWI 288