Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., HTH-type transcriptional activator AmpR from Enterobacter sp. TBS_079

 Score =  120 bits (302), Expect = 3e-32
 Identities = 94/286 (32%), Positives = 150/286 (52%), Gaps = 33/286 (11%)

Query: 3   KSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLT 62
           +S  + ++  F+  A++ + + AA  L LT GA+S+++  LEA  GF LFERH+RG+RL+
Sbjct: 4   RSLPLNAIDAFLVTARHLNLTHAATELCLTQGAVSRKIATLEAWFGFPLFERHARGLRLS 63

Query: 63  EAGRILLTTVQRSYQDIEQTIHSLV--PSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHP 120
             G  LL  +Q ++    +T+ +L     T++  IRLK  P+ A +WLVPRL +  R  P
Sbjct: 64  PQGSALLPELQSTF----ETLLTLADRARTQQTVIRLK-APTCAMRWLVPRLLEVEREQP 118

Query: 121 EIQIQ-TFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWL 179
           ++QI  T      V+ +   YD AI +G          LL EE L PVMS   L A   L
Sbjct: 119 DLQIALTTTTDHNVNFKTESYDAAIVFGT---HMSAGDLLFEEALTPVMSP--LRAGCEL 173

Query: 180 QEDWANSEAWQQVVLLHDAMPWANAARDQ-EWHYW-AHQMGITLPERRDHYFNRTDMAMS 237
                             A+ + +  RD+ +W  W A Q G  +   ++ +F+  D+A++
Sbjct: 174 -----------------GALTFLHPTRDKTDWSLWLAKQEGPGVVMHKNQHFDTMDLAIT 216

Query: 238 AAEAGVGIAMARTALLSNELDTGRLVTPF-APIRAKAGYFLITHQA 282
           AA  G+G+A+A   L+  ++  GRL  PF + I+  A Y L+  ++
Sbjct: 217 AAIQGLGVAIADETLVEEDVRAGRLARPFESSIKTGASYRLVLRES 262