Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  121 bits (304), Expect = 2e-32
 Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 15/300 (5%)

Query: 1   MLKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVR 60
           M K   + +L  F   A+   FS AAA L +T  A+S Q+  LE   G  LF+R  R ++
Sbjct: 1   MRKLPPLRALQVFETAARQQHFSKAAAELCITQSAVSHQVRVLEEYFGEQLFDRQGRKLQ 60

Query: 61  LTEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHP 120
           LT  G+ L   ++R + ++   ++  +  T  +++ L +  SFA KWL+PRL DF R++P
Sbjct: 61  LTPKGQSLFIELERIFNELSD-LNLKIRDTPNQQLCLAVYSSFAVKWLIPRLADFRRQYP 119

Query: 121 EIQIQTFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQ 180
            ++I+        D      D+ I  G L       QLL +E L+PV S ++     W  
Sbjct: 120 SVKIRLEMITQDPDLSTSTADIFI-AGKLNQRGYWQQLLHKERLIPVCSPSFYP--KWRD 176

Query: 181 EDWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPERRDHYFNRTDMAMSAAE 240
            + +N +  QQ +L+ D  P        +WH W+    I L   + H F+   MA+ AA 
Sbjct: 177 INLSNFQ--QQALLIVDEGPLG-----LDWHKWSSAHQIPLNNEQQHIFSHIVMAIEAAI 229

Query: 241 AGVGIAMARTALLSNELDTGRLVTPFAP-IRAKAGYFLITHQ---ATDATQVFCQWLQKQ 296
           AG G+A+A   +++ ++ TGRLV    P +     +  I  Q      A   F  WL+ Q
Sbjct: 230 AGQGLALAPDFMVAGDISTGRLVAVNLPDVHTGFEFSFICKQRRLTEPAIAAFSSWLKSQ 289