Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  117 bits (294), Expect = 3e-31
 Identities = 90/305 (29%), Positives = 138/305 (45%), Gaps = 20/305 (6%)

Query: 9   SLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRIL 68
           +L  F   A+  S +LA+  LH+T GAIS+Q+  LE  LGF+LF R  + V LT   +  
Sbjct: 28  ALRAFESAARLQSMTLASKELHVTHGAISKQIRVLEEFLGFALFVRLHKKVALTNEAKRY 87

Query: 69  LTTVQRSYQDIEQTIHSLVPSTERKE-IRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTF 127
           L  VQ + Q +      L     R + + + + PS    WL+PR+E F  RHP + +   
Sbjct: 88  LPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRHPHLYVDLS 147

Query: 128 AEGALVDSERRDYDLAIDYGALPYPRRDAQL-LMEEWLLPVMSTNYLAAHSWLQEDWANS 186
                VD  +  YD+AI   +   PR    + LM+E L  V + +       L     + 
Sbjct: 148 IGDFAVDFSQGRYDIAI-RSSTQLPRGVNYIKLMDEDLCLVCAPS-------LAPKLKSI 199

Query: 187 EAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPERRDHYFNRTDMAMSAAEAGVGIA 246
           E   QV LL       +  R + W YWA ++G+ L + +        M   AA +G+G A
Sbjct: 200 EDINQVTLL------KHTTRPELWEYWADKVGLVLTQAQTFGVEHFYMLSQAAASGMGAA 253

Query: 247 MARTALLSNELDTGRLVTPF-APIRAKAGYFLITHQATD---ATQVFCQWLQKQIPVQVS 302
           +     +  +L  G LV PF AP  +   Y+L+T ++       Q F  W+ +       
Sbjct: 254 LIPRFFIEEQLANGSLVIPFEAPFTSPYAYYLLTPKSPSLPLKVQAFIDWMLELFSPYRQ 313

Query: 303 QTDRD 307
            +D D
Sbjct: 314 SSDND 318