Pairwise Alignments

Query, 421 a.a., D-amino acid dehydrogenase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Glycine/D-amino acid oxidases (deaminating) from Sphingomonas koreensis DSMZ 15582

 Score =  220 bits (561), Expect = 5e-62
 Identities = 136/399 (34%), Positives = 202/399 (50%), Gaps = 4/399 (1%)

Query: 3   EVLVLGSGVVGLTSAWYLAQAGHDVTVVDRQPRGAEETSFANAGQISYGYSSPWAAPGIP 62
           E++VLG+GVVG+ +A  LA  GH VTVVD        TSFAN  Q+SY Y+   A+P + 
Sbjct: 6   EIIVLGAGVVGMATALTLAGRGHRVTVVDGAGGPGLGTSFANGAQLSYAYTDALASPSVL 65

Query: 63  QKALKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECLKA 122
           ++    +L     L+ QP LDP  L W    L NC    ++ N    LA+A  SR  L  
Sbjct: 66  RQIPHILLGLDPALRFQPHLDPDFLRWSIAFLRNCGAGSFRRNTLAGLALAARSRLALDQ 125

Query: 123 LNQTYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAP 182
           L + ++L+Y     G + ++R      A E  + L   +G+   LL+    +  EP LAP
Sbjct: 126 LTERHALEYGQSVPGKIHIYRTAASFAAAEAMVALKRANGITQTLLDPDAAVALEPMLAP 185

Query: 183 VQEKLVGGLWLPDDETGDCYLFCQQLTELAKQQGVRFHFDCHIQQLVCEGKKIIGVQTDL 242
           V++++ G L  P +  GD + FC    +   + G    FD  ++++  +G +   V    
Sbjct: 186 VRDEIAGALHTPGEAVGDPHRFCSGAHDALIRAGGSSMFDLPVERIETQGSQPAIVTRCG 245

Query: 243 GLLKADAYVVALGSYSTSLLKPLGIEIPVYPVKGYSLTLPIIDEKFAPQSTVMDETYKVA 302
             + AD  V+A G  +  L + LG+ +PV P+KGYS+T P      AP++++ D   +V 
Sbjct: 246 TRVPADRIVLAAGPGAPRLARSLGVYLPVQPMKGYSITAP--TGAAAPRASITDVANRVV 303

Query: 303 LTRFSDRIRVAGTAELAGFDPAIPEARKATIEMVARDLFPHGGDFAK-GQFWTGFRPMTP 361
             R  +R+R+AG AE+   D  +   R   +   AR   P   D+      W G RPMTP
Sbjct: 304 FARLGNRMRIAGLAEVGRRDTRVEPDRLRALTDSARAALPQAADYDNIESSWAGLRPMTP 363

Query: 362 DGTPIIGATPYTNLYTNTGHGTLGWTMACGSASILADVL 400
           D  PI   T    +  NTGHG LGWT A GSA  +A ++
Sbjct: 364 DSLPIT-RTIAPGVIANTGHGGLGWTYAAGSAERVAQII 401