Pairwise Alignments

Query, 421 a.a., D-amino acid dehydrogenase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., D-amino-acid dehydrogenase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  432 bits (1111), Expect = e-126
 Identities = 212/419 (50%), Positives = 282/419 (67%), Gaps = 1/419 (0%)

Query: 2   MEVLVLGSGVVGLTSAWYLAQAGHDVTVVDRQPRGAEETSFANAGQISYGYSSPWAAPGI 61
           M+V+++G+GV+G+T+A+YLA+ G  V V+DRQ     ETS+ANAGQ+SYG SSPWAAPGI
Sbjct: 1   MKVVIMGAGVIGVTTAYYLAKQGVKVVVIDRQTGPGLETSYANAGQLSYGMSSPWAAPGI 60

Query: 62  PQKALKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECLK 121
           P KA+KWM  K  PL I P L P +  W  +ML NC    Y +NK RM+ +++YSR+ + 
Sbjct: 61  PLKAVKWMFMKRRPLFIMPLLSPTMWKWCLQMLRNCNAESYAINKGRMVRVSSYSRDVMP 120

Query: 122 ALNQTYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLA 181
            L     ++Y GRQ GTLQ+FR  KQ+ A + D  +LA+ G  +E+L    C+  EP LA
Sbjct: 121 DLIADTGIEYDGRQMGTLQLFRTAKQMKASKADQAVLAEYGSPYEVLGRDACIEVEPALA 180

Query: 182 PVQEKLVGGLWLPDDETGDCYLFCQQLTELAKQQGVRFHFDCHIQQLVCEGKKIIGVQTD 241
            V+ K VGGL L  D TGDC +F   LT+   + GV F +   I+ +  E  KI GV T+
Sbjct: 181 EVRGKFVGGLRLTSDRTGDCRMFTIALTDKCIEMGVEFQYGQTIKAIAVENGKISGVDTE 240

Query: 242 L-GLLKADAYVVALGSYSTSLLKPLGIEIPVYPVKGYSLTLPIIDEKFAPQSTVMDETYK 300
           + G +  DAYV A+GSY+ ++L P+GI +PVYPVKGYS+TLP+ ++ FAPQST+MDET+K
Sbjct: 241 IAGRISGDAYVCAMGSYAVNVLNPIGIRLPVYPVKGYSVTLPVTNDAFAPQSTIMDETHK 300

Query: 301 VALTRFSDRIRVAGTAELAGFDPAIPEARKATIEMVARDLFPHGGDFAKGQFWTGFRPMT 360
           VA+TR  DRIRVAG AE+ G+   +      T+  V  DLFP GGD ++ + WTG RPMT
Sbjct: 301 VAITRLGDRIRVAGQAEIVGYSNRLGPHATDTVRHVIGDLFPKGGDLSRAEGWTGLRPMT 360

Query: 361 PDGTPIIGATPYTNLYTNTGHGTLGWTMACGSASILADVLTHGESPLSRLGLDLFRYPK 419
           PDGTP++G T Y NL+ NTGHGTLGWTMACGS   +ADV+      +S  GL   RY +
Sbjct: 361 PDGTPVLGPTRYENLFLNTGHGTLGWTMACGSGRAVADVVMGKPPEISMEGLTAARYAR 419