Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., amino acid carrier protein from Pseudomonas stutzeri RCH2

 Score =  319 bits (818), Expect = 1e-91
 Identities = 175/479 (36%), Positives = 278/479 (58%), Gaps = 40/479 (8%)

Query: 5   VDFLNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSKG-ISSFQAL 63
           +D LN +IWS  LI + +G GL +++ + FVQ R+F  M+ +  +  E   G +SSFQAL
Sbjct: 2   LDLLNDLIWSKLLIVMLIGLGLLFTIRSGFVQFRYFGNMFTIFGHAFERQPGQLSSFQAL 61

Query: 64  AVSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYKE-EDNGE 122
            +S++GRVG GNIAGV+ AI  GGPGA+FWMW+VA  G AT+Y E +LAQ+YK  E +G 
Sbjct: 62  MLSVAGRVGAGNIAGVSVAIMLGGPGAIFWMWVVALVGMATSYFECSLAQLYKRREPDGT 121

Query: 123 FRGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGVQSNSIGNAVESAFGSGPMIETAL 182
           +RGGPA+YI+  +GQ+W   V +I  +   G     VQS ++ +++   FG         
Sbjct: 122 YRGGPAFYIQHGLGQRWLGIVVSILLLMTFGFGFNAVQSFTVASSLHDTFG--------- 172

Query: 183 GTFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILLNIGEVP 242
                  + +G  +++++  IIFGG++RIA +  ++VP MA +Y+  A  +I  N   +P
Sbjct: 173 ----VPTVASGIALTLVIAGIIFGGIRRIAKWADVLVPVMAFSYLAMALFVIGSNFSAIP 228

Query: 243 RIIAMIVGDAFSP----MAGVGAAIGWGVKRGVYSNEAGQGTGPHAAAAASVEHPAQQGL 298
               +I   AF        G+GAAI  GVKRG++SNEAG G+ P+ AA A V+HP  QG+
Sbjct: 229 ETFGLIFRSAFGLEQAFAGGIGAAILMGVKRGLFSNEAGLGSAPNVAAVAEVKHPVAQGI 288

Query: 299 VQSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIASSPAFTQIAVDS 358
           VQS S++IDT+++CS TA +IL++G Y       G+ L               TQ AV +
Sbjct: 289 VQSLSVFIDTIILCSCTALIILLSGVYEPGMDQAGVVL---------------TQTAVAA 333

Query: 359 ALPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYIRRTFKVDGLMFVLKLVLMASVFYG 418
            +   G+ FV+ AL  F FTT++  YY+ E  + +          + + +++++  V +G
Sbjct: 334 VVGEWGRVFVSVALLLFVFTTLIYNYYLGENALGFFTEKRMP---VVIYRILVVILVLWG 390

Query: 419 TVKTANLAWALGDVGVGLMAWLNIVGIIIIFFMSKPTMAALKDYEDQQKQGVTEFTFNP 477
           +V+     +A  DV +GL+A  N++ + ++F   K  +  ++DY+ Q + G+ +   +P
Sbjct: 391 SVQDLGTVFAFADVTMGLLAIANLIAVALLF---KVGLRLMRDYDRQIRAGIEQPVLDP 446