Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., amino acid carrier protein from Pseudomonas stutzeri RCH2

 Score =  275 bits (703), Expect = 2e-78
 Identities = 166/461 (36%), Positives = 244/461 (52%), Gaps = 45/461 (9%)

Query: 1   MQSFVDFLNGIIWSPALIYLCLGAGLFYSVLTRFVQVRH----FFEMWRLLLNNKESSKG 56
           + + V+ +NG++W P ++ L LG GLF  +  +F+ +      F  MWR      E++  
Sbjct: 4   LNNLVNSVNGLVWGPPMLVLILGTGLFLMIFLKFMPLTRIPTGFALMWRGRTKGDEATGE 63

Query: 57  ISSFQALAVSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYK 116
           IS FQAL  SL+  VGTGNIAGVA AI  GGPGA+FWMW  A  G AT Y E  LA  Y+
Sbjct: 64  ISPFQALMTSLAATVGTGNIAGVATAIFLGGPGALFWMWCTALVGMATKYCEVVLAVHYR 123

Query: 117 E-EDNGEFRGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGVQSNSIGNAVESAFGSG 175
           E +D GE  GGP Y I+  +G+KW  W   + T FA   +  G+    IGN V+      
Sbjct: 124 EKDDRGEHVGGPMYAIKNGLGKKW-IW---LGTAFA---IFGGLAGFGIGNMVQ----VN 172

Query: 176 PMIETALGTFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIIL 235
            M      TF+     TG V  +++G +I GG++RI      +VPFM LAY+I A V+++
Sbjct: 173 SMAHALETTFAVPLWATGLVTMVIVGLVILGGIRRIGVVAASLVPFMCLAYLIAAAVVLV 232

Query: 236 LNIGEVPRIIAMIVGDAFSPMAGVG--------AAIGWGVKRGVYSNEAGQGTGPHAAAA 287
           +N+  +P    +I   AF+P+A  G        AAI +GV RG++SNEAG GT   A AA
Sbjct: 233 VNVSAIPAAFDLIFTHAFTPIAATGGFAGAAVMAAIRFGVARGIFSNEAGLGTAGIAQAA 292

Query: 288 ASVEHPAQQGLVQSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIAS 347
            +     + G++     +IDT++VCS T   I+ TG +                     S
Sbjct: 293 GTTTSSVRSGMIGMLGTFIDTIIVCSMTGLAIICTGVWTSG-----------------ES 335

Query: 348 SPAFTQIAVDSALPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYIRRTFKVDGLMFVL 407
             A +  A +SA+PGIG   +  AL  FAFTTIL + Y  E    ++  T  +    +  
Sbjct: 336 GAALSAAAFESAMPGIGGIILTIALVVFAFTTILGWSYFGEKCWEFLVGTRAI----WPF 391

Query: 408 KLVLMASVFYGTVKTANLAWALGDVGVGLMAWLNIVGIIII 448
           +++ + +V +G +   + AW L D   GLMA  N++ ++++
Sbjct: 392 RVIWVLAVPFGAIAQLDFAWLLADTLNGLMAIPNLISLLLL 432