Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Sodium:alanine symporter from Pseudomonas syringae pv. syringae B728a

 Score =  322 bits (826), Expect = 1e-92
 Identities = 178/477 (37%), Positives = 287/477 (60%), Gaps = 43/477 (9%)

Query: 6   DFLNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSKG-ISSFQALA 64
           DFL+G +    LI L +G G ++++ +RFVQ RHFF M+ +  ++  SS G +SSFQAL 
Sbjct: 7   DFLSGKV----LIVLIVGLGSYFTIRSRFVQFRHFFHMFSVFRDSLRSSAGQLSSFQALM 62

Query: 65  VSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYKEEDN-GEF 123
           +SL+GRVG GNIAGV  A+  GGPGAVFWMW+ A  G A+++ E +LAQ+YK +D  G+F
Sbjct: 63  LSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMASSFIECSLAQLYKRKDTEGQF 122

Query: 124 RGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGVQSNSIGNAVESAFGSGPMIETALG 183
           RGGPA+YI+  +G++W   V A+  +   G    G+QS+++ ++++SAF     ++T   
Sbjct: 123 RGGPAFYIQHGLGKRWLGMVMAVLLLVTFGFAFNGLQSHAVTDSLKSAFN----VDTRT- 177

Query: 184 TFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILLNIGEVPR 243
                   TG  + +LLG    GG+KRIA+ + ++VP   L YI     +I+L I  VP 
Sbjct: 178 --------TGICLVVLLGLAFIGGIKRIAAISDLLVPVKTLIYIAVTIYVIVLQIDHVPG 229

Query: 244 IIAMIVGDAFS--PMAG--VGAAIGWGVKRGVYSNEAGQGTGPHAAAAASVEHPAQQGLV 299
           ++  IV  AF   P+ G  +G+AI  GVKRGV++NEAG G+ P+ AA A VEHP  QG+V
Sbjct: 230 MLMTIVRSAFGLDPVFGGLIGSAIVMGVKRGVFANEAGLGSAPNVAAVAQVEHPVAQGVV 289

Query: 300 QSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIASSPAFTQIAVDSA 359
           Q+FS+++DT ++C+ TA +IL++G Y++     G+ L QN  A ++              
Sbjct: 290 QAFSVFLDTFVICTCTALLILLSGIYDIGYDGNGIVLAQNSLAAVVGD------------ 337

Query: 360 LPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYIRRTFKVDGLMFVLKLVLMASVFYGT 419
               G+ F++ AL  F FT+IL  YY+ E ++ ++    K+  ++ + ++ ++  + +G 
Sbjct: 338 ---WGRVFISVALALFVFTSILYNYYLGENSLRFLFGE-KMQTII-IYRIAVLVLIMWGA 392

Query: 420 VKTANLAWALGDVGVGLMAWLNIVGIIIIFFMSKPTMAALKDYEDQQKQGVTEFTFN 476
           V       A  D+ + ++A++N++ + ++F   K     L DY+ Q++ GV    F+
Sbjct: 393 VVDLKDVLAFADITMTMLAFVNLIALAMLF---KVVKRILNDYDAQRRAGVKTPVFD 446