Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., sodium:alanine symporter family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  258 bits (660), Expect = 2e-73
 Identities = 166/452 (36%), Positives = 243/452 (53%), Gaps = 49/452 (10%)

Query: 8   LNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSKGISSFQALAVSL 67
           LN I+W P  + L +G G++++V  + +Q+        LL         +SSF AL  +L
Sbjct: 10  LNAIVWGPVTLCLLVGTGVYFTVRLKLLQLVKLPLALSLLFKPASGKGELSSFGALCTAL 69

Query: 68  SGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYKEED-NGEFRGG 126
           S  +GTGNI GVA AI  GGPGA+FWMW+ AFFG AT YAE  LA  Y+  D  G   GG
Sbjct: 70  SATIGTGNIVGVATAIKLGGPGALFWMWVAAFFGMATKYAECLLALKYRTTDARGNIAGG 129

Query: 127 PAYYIEKAMGQKWYAWVFAIATIFACGVLLPGV----QSNSIGNAVESAFGSGPMIETAL 182
           P YYIE+ +G  W A +FA   IF  GV   G+    Q N+I +A+  AF        A+
Sbjct: 130 PMYYIERGLGLGWLARLFA---IFGVGVAFFGIGTFAQVNAISDAMTVAF--------AV 178

Query: 183 GTFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILLNIGEVP 242
            T+      T +V+++L+  +  GGVKRIAS  Q +VP MA+ Y++    ++L     + 
Sbjct: 179 PTW-----VTASVLTLLVAAVTLGGVKRIASVAQTLVPAMAIGYVLACLWVLLSLHDAIV 233

Query: 243 RIIAMIVGDAFSPMAG--------VGAAIGWGVKRGVYSNEAGQGTGPHAAAAASVEHPA 294
             ++++V  AF+P+A         V  AI  G+ RGV+SNE+G G+ P AAA A  + P 
Sbjct: 234 PALSLVVNGAFTPVAAGGGFLGATVALAIQTGIARGVFSNESGLGSAPIAAATARTKEPV 293

Query: 295 QQGLVQSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIASSPAFTQI 354
           +QGLV     + DTL++C+ T  +++ITG ++   A   M            +S AF+  
Sbjct: 294 EQGLVSMTGTFFDTLIICTMTGLVLIITGVWSGDSAGAAM------------TSAAFSA- 340

Query: 355 AVDSALPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYIRRTFKVDGLMFVLKLVLMAS 414
              +  P +G+  V  AL  FAFTTIL + Y  E   +Y+    +  GL  ++ L+L+A 
Sbjct: 341 ---ATNPLLGQYLVTVALVCFAFTTILGWNYYGERCWSYLTGG-RYAGLYRLVFLLLIAG 396

Query: 415 VFYGTVKTANLAWALGDVGVGLMAWLNIVGII 446
              G     +L W L D+  GLMA  N++ +I
Sbjct: 397 ---GAFIKLDLIWLLADIVNGLMAIPNLIALI 425