Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., amino acid carrier protein (RefSeq) from Shewanella loihica PV-4

 Score =  256 bits (655), Expect = 9e-73
 Identities = 161/452 (35%), Positives = 235/452 (51%), Gaps = 45/452 (9%)

Query: 8   LNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSKGISSFQALAVSL 67
           +N I+W P  + L +G GL+ ++  R +QV       RLL         +SSF AL  +L
Sbjct: 10  INAIVWGPITLCLLVGTGLYLTLRLRLIQVFKLPLALRLLFKPASGQGDLSSFAALCTAL 69

Query: 68  SGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYKEED-NGEFRGG 126
           S  +GTGNI GVA AI  GGPGA+FWMW+ AFFG AT Y E  LA  Y+  D  G   GG
Sbjct: 70  SATIGTGNIVGVATAIKVGGPGALFWMWLAAFFGMATKYGECMLALKYRTTDARGNIAGG 129

Query: 127 PAYYIEKAMGQKWYAWVFAIATIFACGVLLPGV----QSNSIGNAVESAFGSGPMIETAL 182
           P YYIE+ +G  W A +FA   +F  GV   G+    Q N+I +A+  AF     +    
Sbjct: 130 PMYYIERGLGLGWLAKLFA---LFGVGVAFFGIGTFAQVNAISDAMTIAFHVPAWV---- 182

Query: 183 GTFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILLNIGEVP 242
                    T  V+++L+  +  GGVKRIA   Q +VP MAL Y++    I++    ++ 
Sbjct: 183 ---------TALVLTLLVAAVTLGGVKRIAKVAQKLVPSMALGYVLACLWILVTFSEQII 233

Query: 243 RIIAMIVGDAFSPMAGVGA--------AIGWGVKRGVYSNEAGQGTGPHAAAAASVEHPA 294
             + +++  AFSP++  G         AI  G+ RGV+SNE+G G+ P AAAAA  + P 
Sbjct: 234 PALQLVIHSAFSPISAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTKEPV 293

Query: 295 QQGLVQSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIASSPAFTQI 354
           +QGLV     + DTL++C+ T  +++ITG ++   A   M            +S AF   
Sbjct: 294 EQGLVSMTGTFFDTLLICTITGLVLIITGVWSGDAAGAAM------------TSAAFA-- 339

Query: 355 AVDSALPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYIRRTFKVDGLMFVLKLVLMAS 414
              SA+  IG+  V  AL  FAFTTIL ++Y  E    Y+      +  + + + + ++ 
Sbjct: 340 TGGSAV--IGQYLVTIALVCFAFTTILGWHYYGERCWYYLTGHKLGERGIKIYQFIFLSL 397

Query: 415 VFYGTVKTANLAWALGDVGVGLMAWLNIVGII 446
           +  G     +L W L D   GLMA  N++ +I
Sbjct: 398 IAVGAFIQLDLIWLLADTVNGLMAIPNLIALI 429