Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., amino acid carrier protein (RefSeq) from Shewanella sp. ANA-3

 Score =  254 bits (649), Expect = 5e-72
 Identities = 162/460 (35%), Positives = 239/460 (51%), Gaps = 53/460 (11%)

Query: 2   QSFVDFLNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSKGISSFQ 61
           Q+ +  LNGI+W P  + L +G G++ ++  R +QV        LL    +    +SSF 
Sbjct: 4   QALLSSLNGIVWGPVTLCLLVGTGIYLTLRLRLIQVFRLPMALGLLFKPAKGHGDLSSFA 63

Query: 62  ALAVSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYKEED-N 120
           AL  +LS  +GTGNI GVA AI  GGPGA+FWMW+ AFFG AT YAE  LA  Y+  D  
Sbjct: 64  ALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDAR 123

Query: 121 GEFRGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGV----QSNSIGNAVESAFGSGP 176
           G+  GGP YYIE+ +G  W A +FA   +F  GV   G+    Q N+I +A+  AF   P
Sbjct: 124 GQIAGGPMYYIERGLGLHWMAKLFA---LFGVGVAFFGIGTFAQVNAISDALTIAF-EVP 179

Query: 177 MIETALGTFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILL 236
              TAL            V+++L+  +  GGVKRI++  Q +VP M++ Y++    I++ 
Sbjct: 180 TWATAL------------VLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILVS 227

Query: 237 NIGEVPRIIAMIVGDAFSPMAGVGA--------AIGWGVKRGVYSNEAGQGTGPHAAAAA 288
               +   + ++V  AF+P++  G         AI  G+ RGV+SNE+G G+ P AAAAA
Sbjct: 228 FAESILPALQLVVESAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAA 287

Query: 289 SVEHPAQQGLVQSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIASS 348
               P +QGLV     + DT+++C+ T  +++ITG ++   A   M            +S
Sbjct: 288 KTNEPVEQGLVSMTGTFFDTIIICTITGLVLIITGVWSGDTAGAAM------------TS 335

Query: 349 PAFTQIAVDSALPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYI--RRTFKVDGLMFV 406
            AF+          IG+  V  AL  FAFTTIL ++Y  E    Y+   R  +   ++F 
Sbjct: 336 AAFSL----GGSAAIGQYLVTIALVCFAFTTILGWHYYGERCWYYLVGERGLRAYQMLF- 390

Query: 407 LKLVLMASVFYGTVKTANLAWALGDVGVGLMAWLNIVGII 446
                +  +  G     ++ W L D   GLMA  N++ II
Sbjct: 391 -----LGLIAVGAFIKLDVIWLLADTVNGLMAIPNLIAII 425