Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., amino acid carrier protein (RefSeq) from Shewanella sp. ANA-3

 Score =  600 bits (1548), Expect = e-176
 Identities = 303/492 (61%), Positives = 373/492 (75%), Gaps = 24/492 (4%)

Query: 1   MQSFVDFLNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSKGISSF 60
           M   V+ +N I+WSPAL+YLCLG GLF+S+ +RF+Q+RH  EM RL+ + K +  G+SSF
Sbjct: 1   MNEIVNAVNNIVWSPALVYLCLGVGLFFSLRSRFLQLRHLPEMIRLMFDGKSTDAGVSSF 60

Query: 61  QALAVSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYKEEDN 120
           QALA++L+GRVGTGNIAGVA AI FGGPGA+FWMWMVAF GA++A+ ESTL Q+YKE+ N
Sbjct: 61  QALAMTLAGRVGTGNIAGVATAITFGGPGALFWMWMVAFLGASSAFVESTLGQVYKEKIN 120

Query: 121 GEFRGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGVQSNSIGNAVESAFGSGPMIET 180
           GE+RGGPA+YIEK +G KWYAW FAIATIFACG+LLPGVQ+NSIG+++++AF   P +  
Sbjct: 121 GEYRGGPAFYIEKGLGMKWYAWTFAIATIFACGILLPGVQANSIGSSLKTAFDIDPNV-- 178

Query: 181 ALGTFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILLNIGE 240
                      T  ++++LLGFIIFGGVKRIA F   VVPFMAL YII A VII LNIG+
Sbjct: 179 -----------TAAILAMLLGFIIFGGVKRIAHFASTVVPFMALGYIIVACVIIALNIGQ 227

Query: 241 VPRIIAMIVGDAFSPMAGVGAAIG----WGVKRGVYSNEAGQGTGPHAAAAASVEHPAQQ 296
           +P II +I+  AF   AG GA +G    WGVKRG+YSNEAGQGTGPHA++AA+V HPA+Q
Sbjct: 228 LPDIIMLILKSAFGLDAGFGAILGLAIMWGVKRGIYSNEAGQGTGPHASSAAAVSHPAKQ 287

Query: 297 GLVQSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIASSPAFTQIAV 356
           GLVQ+FS+Y+DTL VCSAT FM+LITG YNV G  +G  L   +    +A+ P + Q A+
Sbjct: 288 GLVQAFSVYVDTLFVCSATGFMLLITGLYNVQG-PDGAALYTGIAG--VAAGPGYVQTAM 344

Query: 357 DSALPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYIRRTFKVDGLMFVLKLVLMASVF 416
           +S +PG G  FVA ALFFFAFTTI+AYYYIAETN+AYI R      L  VLK+VLMAS  
Sbjct: 345 ESMMPGFGNMFVAVALFFFAFTTIVAYYYIAETNIAYINRKANRPWLTVVLKVVLMASTV 404

Query: 417 YGTVKTANLAWALGDVGVGLMAWLNIVGIIIIFFMSKPTMAALKDYEDQQKQGVTEFTFN 476
           YGTVKTA+LAW +GD+GVGLMAWLNI+ II+   + +     LKDYE QQKQGV E  F+
Sbjct: 405 YGTVKTADLAWGMGDIGVGLMAWLNIIAIIL---LQRIAFTCLKDYESQQKQGV-EPLFD 460

Query: 477 PVKLGIKGATYW 488
           P KLGI  A YW
Sbjct: 461 PEKLGIPHADYW 472