Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  144 bits (363), Expect = 3e-39
 Identities = 96/294 (32%), Positives = 150/294 (51%), Gaps = 4/294 (1%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           LR  DLNLL VFD++M+  ++S+AA +L ++ + VS  L+RLR+Q+G+PLF R  RG+ P
Sbjct: 5   LRQLDLNLLLVFDALMQEQNLSRAAVRLHLSQSTVSNALARLRKQLGEPLFQRTARGMLP 64

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A  ++  V E L  +R GL   AG D   S+  F +    Y   V LP  L ++  +
Sbjct: 65  TPQAQALYGPVREALHLLRTGLAPQAGIDTG-SELTFRVSMNDYAQAVFLPVALSRLQAL 123

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP + ++++S  DD  T  + L   E DL +  L      +    + EE L V+ + +HP
Sbjct: 124 APRLVLSVQS--DDADTLVKRLRTGELDLAIDYLHFD-DELRYEPLREEELAVIASADHP 180

Query: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243
            +   L+  Q+    H ++  R         ++      R+V       L + +  S T 
Sbjct: 181 AIQQQLTLAQYQNASHVSVHPRAGRGSPLEIVLGSSKVQRKVQLLVPHYLAIPSVVSQTR 240

Query: 244 LLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQI 297
           LL   PK LA+ +AE+  LQ+ PLP  +  V   + WH+ +    GL WLR Q+
Sbjct: 241 LLGTVPKALAEHFAEQYALQVFPLPMAMAPVQVSLIWHRQQDASVGLRWLRRQL 294