Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  134 bits (338), Expect = 2e-36
 Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 6/294 (2%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           L   DLNL  VFD++    ++++A   +G+T  AVS  L+RLRE   DPLF+R  +G+ P
Sbjct: 3   LNKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVP 62

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A N+   V   L  +R  ++    F PA + + F I      + V+LPPL Q++  +
Sbjct: 63  TPMAQNIIGPVRNALQLLRVSVQESRTFSPAQANKTFRISMTDLTEAVMLPPLFQRLRRL 122

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP+  V ++S        ++ L+    D  + A   + P +   ++ E+  +    + HP
Sbjct: 123 APN--VKIESMLAKRRETTKELAAGRLDFAMDAPLNTDPQVRHVKLLEDRYICAMRRGHP 180

Query: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243
                L+ EQ+ +  H  ++SRR G  L    + ++   R++  +S+  L        TD
Sbjct: 181 LAKDKLTLEQYLSLSHIHISSRRSGLGLVDLALGKMGLQRKIALRSQHYLMATQVIDQTD 240

Query: 244 LLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQI 297
           +    P+R    +A +  L    LP +I+ + T + WH++  QD    W+REQ+
Sbjct: 241 MAVTVPER----FARRHNLHQVDLPVDIQPLETHIYWHESTDQDPANRWMREQM 290