Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  112 bits (281), Expect = 8e-30
 Identities = 89/311 (28%), Positives = 141/311 (45%), Gaps = 18/311 (5%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           LR  DLNLL VF+++M   SV++AA+KL +   A+S  LSRLR    DPLF+R GR ++P
Sbjct: 6   LRRVDLNLLIVFETLMHERSVTRAAEKLFLGQPAISAALSRLRGLFDDPLFVRTGRSMEP 65

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A  +   ++  L +I   +   + FDPATS   F IG     +  +LP LL+++   
Sbjct: 66  TARATEIFALLSPALDSISTAVSRASEFDPATSTSVFRIGLSDDVEFALLPTLLKRLRSE 125

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP I + ++        P            LA+  IS     T  +   A   V  ++ P
Sbjct: 126 APGIVLVVRRVNYILMPP-----------LLASGEISVGVSYTQDLPANAKRKVLRRSKP 174

Query: 184 RL------GSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMA 237
           +L         LS + F A  H  ++     +      ++++   R V         L  
Sbjct: 175 QLLRADSIPGPLSLDDFCARPHALVSFAGDLSGFIDEHLEKLDRKRHVVLAVPQFNGLAT 234

Query: 238 TASVTDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQI 297
             + TD++   P   A +     G++ + LP E R+    M W  A+  D G  WLR +I
Sbjct: 235 LLTGTDIIATVPDYAAQVLTAAGGVRSEDLPIETRTFELHMAWRGAQDNDPGERWLRSRI 294

Query: 298 EAILCANPQSI 308
           + +   +P S+
Sbjct: 295 Q-MFFGDPDSL 304