Pairwise Alignments

Query, 279 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  164 bits (415), Expect = 2e-45
 Identities = 90/239 (37%), Positives = 137/239 (57%), Gaps = 4/239 (1%)

Query: 33  KSVCDALDLAIPHGKFSVIVGPNGCGKSTLLKSLCRLLKPLAGQVLLDGQNIHQLPTKVV 92
           +++   + L +P GK   I+GPNG GKS+LL+ L R L P +G++ L GQ I  L  +  
Sbjct: 48  RAILSGVKLDLPEGKMLGIIGPNGAGKSSLLRCLYRFLTPSSGEIQLFGQPIASLSARAF 107

Query: 93  AKQLGLLPQSALTPEGIKVVDLVSRGRYPHQGLFRQWSRVDERAVEEAMRATHVHELAQH 152
           A+++ ++ Q       +    LV+ G  PH+  F   ++ D  AV +A+    + E A  
Sbjct: 108 AREVAVVLQDTPQHFDMTTAQLVALGLTPHKAAFSMTTKADRLAVSQALETVGLKERAGQ 167

Query: 153 SVDQLSGGQRQRVWVAMALAQQTPYLLLDEPTTYLDIAHQIELLDLFWRLNRQQGHTLVA 212
           +   LSGG++QR  +A A+AQQ   L+LDEPT +LDI +QI++L+L   L    G T+V 
Sbjct: 168 TYASLSGGEKQRALIARAIAQQPKLLILDEPTNHLDIRYQIQILELLKAL----GVTVVI 223

Query: 213 VLHDLNQACRYADHLIVLQEGKIVAQGDPHSLVTPALVKQVFGIDCVVMPDPISCTPLI 271
            +HDLN A    D L++L +GK VAQG P  +++ A + +VF + C V P P    P I
Sbjct: 224 SIHDLNLASALCDQLLLLDQGKAVAQGSPKQVLSEAQIARVFCVCCQVSPHPQHGNPQI 282