Pairwise Alignments

Query, 279 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis JJ

 Score =  124 bits (312), Expect = 2e-33
 Identities = 73/252 (28%), Positives = 130/252 (51%), Gaps = 10/252 (3%)

Query: 21  LKTERLSLGYEGKSVCDALDLAIPHGKFSVIVGPNGCGKSTLLKSLCRLLKPLAGQVLLD 80
           L  E ++  Y    + +     +  G    I+GPNG GKST+LK +  ++   +G +++D
Sbjct: 2   LNIENINFNYGKNKILNDCSFKLDSG-IGCILGPNGAGKSTILKCISGIVPVKSGSIIID 60

Query: 81  GQNIHQLPTKVVAKQLGLLPQSALTPEGIKVVDLVSRGRYPHQGLFRQWSRVDERAVEEA 140
           G+   Q+  K  ++ +   PQ         V ++V  GR PH    R  S+ DE+ V E 
Sbjct: 61  GEKTTQMNYKDRSRLISYSPQEFSINFPYTVFEVVLMGRNPHVNFLRGPSKKDEQKVTEI 120

Query: 141 MRATHVHELAQHSVDQLSGGQRQRVWVAMALAQQTPYLLLDEPTTYLDIAHQIELLDLFW 200
           ++   +  L       LSGGQ++ V VA AL Q    ++ DEPT++LD  +Q  +L +  
Sbjct: 121 LKLLKISHLKDKEFISLSGGQKRLVMVATALIQDAKLMIFDEPTSFLDYKNQYLVLSVIE 180

Query: 201 RLNRQQGHTLVAVLHDLNQACRYADHLIVLQEGKIVAQGDPHSLVTPALVKQVFGIDC-- 258
           +++++   T++  LHD N A  + D+L +++ GKI+++    + V P   ++++GI+   
Sbjct: 181 KISKEMDKTVLLSLHDPNLAFLFCDNLFLMKNGKILSEIADKNSVCPENFQELYGINTKF 240

Query: 259 -------VVMPD 263
                  VV+PD
Sbjct: 241 ADIFGQKVVLPD 252