Pairwise Alignments

Query, 279 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  173 bits (439), Expect = 4e-48
 Identities = 96/265 (36%), Positives = 149/265 (56%), Gaps = 5/265 (1%)

Query: 7   ADLQSAALKAEHHRLKTERLSLGYEGKSVCDALDLAIPHGKFSVIVGPNGCGKSTLLKSL 66
           A L  AA  A +  LK  +LS   EGK++   +  A+P G+   ++GPNG GKS+LL+ L
Sbjct: 8   APLAPAATSA-NMALKVSQLSWAIEGKTILSEISFALPQGEMLGLIGPNGAGKSSLLRCL 66

Query: 67  CRLLKPLAGQVLLDGQNIHQLPTKVVAKQLGLLPQSALTPEGIKVVDLVSRGRYPHQGLF 126
            R ++P  G + L  Q+I +L  K  A ++ ++ Q       +    LV+ G  PH+G+F
Sbjct: 67  YRFIRPAKGHISLFSQDISELSPKAFACKVAVVQQDTPQYFDMTTEQLVAMGLTPHKGMF 126

Query: 127 RQWSRVDERAVEEAMRATHVHELAQHSVDQLSGGQRQRVWVAMALAQQTPYLLLDEPTTY 186
              S  D   + +A+    +        D+LSGG++QR  +A A+ QQ   L+LDEPT +
Sbjct: 127 DTNSSGDGEKIAKALEKVGLSHKVHQQYDRLSGGEKQRALIARAIVQQPQLLILDEPTNH 186

Query: 187 LDIAHQIELLDLFWRLNRQQGHTLVAVLHDLNQACRYADHLIVLQEGKIVAQGDPHSLVT 246
           LDI +QI++L+L     R  G +++A +HDLN AC   DHL++L +G++ A G P  ++T
Sbjct: 187 LDIRYQIQILELV----RSLGISVIASIHDLNLACALCDHLLLLDKGQVSAMGTPAQVLT 242

Query: 247 PALVKQVFGIDCVVMPDPISCTPLI 271
              + +VFG+   V P P    PLI
Sbjct: 243 EERIAEVFGVCAQVTPHPQHGNPLI 267