Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  123 bits (309), Expect = 6e-33
 Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 8/322 (2%)

Query: 41  LSLIVLALMILATCVGKLPISISDVTAILLG-EVTSGFKRQVLLDIRLPRIFTALFAGAA 99
           L+L+++  ++L   +G    S+ +V   L   +  S   R V+ DIRLP    A+  GAA
Sbjct: 29  LTLLLICSVLLDLALGPARYSLDEVLGALFSPDSASPQVRVVMWDIRLPVALMAVAVGAA 88

Query: 100 LGLSGAIFQSISRNPLGSPDIIGFTS----GAATGALLQIILFS-GSGVAVVFSAIAGGV 154
           L L+GA  Q+I  NPL SP  +G ++    GAA G    + LF   +   V  +A    +
Sbjct: 89  LSLAGAQMQTILNNPLASPFTLGISAAASFGAAMGLAFGVALFPLAAQYMVPVNAFIMAM 148

Query: 155 MTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLSGSLH 214
           ++A+ ++ LS++ G      +VL GI +     AL  L+    +  +      W  GSL 
Sbjct: 149 LSALLIHFLSLRRGVTAE-TIVLLGIALVFTFNALLALVQFFATEQAVAAVVFWTMGSLT 207

Query: 215 AREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAVTLA 274
              W  +  +   +LV LP+    A +L  L +GD+ A   G+ V  +R   ++    LA
Sbjct: 208 KATWPKLGVICLVILVTLPIFARRAWALTALRLGDDKAASFGINVRSLRFQTLIMVSLLA 267

Query: 275 ALATGAAGPIAFIALAAPQLAARL-RQTANIPLVSAGLMGACLLLGADLLTQWMPLALTL 333
           +      G I FI L  P +A  L  +     L ++ L GA +L  + ++++ +      
Sbjct: 268 SFPVAFVGTIGFIGLVGPHIARMLIGEDQRFFLPASLLTGALILSASSVISKTLIPGAIF 327

Query: 334 PIGRITGLVGGMYLLILLMRSK 355
           PIG +T L+G  + + L++  K
Sbjct: 328 PIGVVTSLIGVPFFISLILGGK 349