Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  186 bits (473), Expect = 6e-52
 Identities = 115/324 (35%), Positives = 188/324 (58%), Gaps = 9/324 (2%)

Query: 39  LVLSLIVLALMILATCVGKLPISISDV-TAILLGEVTSGFKRQVLLDIRLPRIFTALFAG 97
           L+L + V+AL + A  VG   +S++ V  A+L  E  +   R +L ++RLPR+  A+ AG
Sbjct: 28  LLLMVAVVALALYALTVGSYSLSVAQVWQALLAPEQVNSTMRNLLWELRLPRVLLAVLAG 87

Query: 98  AALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGVAVVF--SAIAGGVM 155
           AA+ L+G + QS++RNPL +P ++G  SGA+   LL I+L+        +  +A+AGG+ 
Sbjct: 88  AAMSLAGLLMQSLTRNPLAAPGLVGVESGASVTMLLIIVLWPALLPLEFYPLAALAGGLA 147

Query: 156 TAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLSGSLHA 215
            A  V LLS + G +   RL+L G+G+ ++L+A+  LL+  G++D   +A +WL GSLH 
Sbjct: 148 VAFFVALLSWRQG-ISPLRLILVGVGLTAMLSAVADLLITYGNIDQVESALMWLGGSLHR 206

Query: 216 REWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAVTLAA 275
             W  V  +   +LV    +    R L +L++G+++A   G+ V  I + ++L +V L A
Sbjct: 207 ASWPQVHSLGLWLLVAGVPLLFCHRQLNLLQLGEKVALSRGLNVTWIMVSLLLCSVMLTA 266

Query: 276 LATGAAGPIAFIALAAPQLAARL---RQTANIPLVSAGLMGACLLLGADLLTQWMPLALT 332
            A    G + F+ L AP LA ++   R  A IPL  + L+GA L+L  D L + +   L 
Sbjct: 267 AAVANVGTMTFVGLVAPHLARQMAGDRHGALIPL--SALVGALLVLAGDTLGRGLLPPLQ 324

Query: 333 LPIGRITGLVGGMYLLILLMRSKN 356
           LP G +  ++G  YL++LL R ++
Sbjct: 325 LPAGLVVAIIGAPYLIVLLARQRS 348