Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Acidovorax sp. GW101-3H11

 Score =  144 bits (362), Expect = 4e-39
 Identities = 115/331 (34%), Positives = 169/331 (51%), Gaps = 39/331 (11%)

Query: 44  IVLALMILATCVGKLPISISDVTAILLGEVTSGFKRQVLLDIRLPRIFTALFAGAALGLS 103
           ++LA  +L  C   +  +  D    + G+  +    Q++ DIRLPR   A  AGA LGLS
Sbjct: 24  LLLASAVLTVCGASVGSTGFDSVLRMHGDPVAW---QIVWDIRLPRTLGAWLAGALLGLS 80

Query: 104 GAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGVAVVFSAIAG-------GVMT 156
           GA+ Q + RNPL  P ++G  SGAA G  + + +F  S VA  + A  G       G   
Sbjct: 81  GAVAQGLFRNPLADPYLLGSASGAALGGAVAMAMFGVSPVAAQWLARIGITGMAFLGAAG 140

Query: 157 AIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLL-LVKGSLDSAITANL-------- 207
           A+ + L+  + G     RL+L G+ VG VL A+  L+ L    +  A+ A +        
Sbjct: 141 AVVLTLILAR-GVQHTLRLLLAGVIVGVVLGAMRDLVELASPDILQAMQAFVLGSTAFVG 199

Query: 208 WLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMI 267
           W++  L A  W      +C  +  +     LAR+L  L +G+  A  LG+ + P+R  ++
Sbjct: 200 WMACVLMAVAWG-----LCSAVAWM-----LARALDGLTLGEATAASLGLPLLPMRAGLV 249

Query: 268 LAAVTLAALATGAA----GPIAFIALAAPQLAARL-RQTANIPLVSAGLMGACLLLGADL 322
            A     ALATGAA    G IAF+ LAAP L   + R T    +V + LMGA LL+ AD+
Sbjct: 250 AA----MALATGAAVAQTGLIAFVGLAAPHLVRSIVRVTHERHIVLSSLMGAVLLMAADI 305

Query: 323 LTQWMPLALTLPIGRITGLVGGMYLLILLMR 353
           L +W+     LP+G +T  +GG YLL L+ R
Sbjct: 306 LARWLLAPQELPVGVLTAALGGTYLLWLMHR 336