Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  148 bits (374), Expect = 2e-40
 Identities = 101/338 (29%), Positives = 172/338 (50%), Gaps = 16/338 (4%)

Query: 32  RRNIAVALVLSLIVLALMILATCVGKLPISISDVTAILLGEV----------TSGFKRQV 81
           RR + + + L+L++L   ++    G  P+ +S V AIL+ ++          T+G +  V
Sbjct: 12  RRYLGLLIALTLLLLTSCLVCITFGAAPVPLSRVMAILMFKLSGTAEHPPLWTTGQETIV 71

Query: 82  LLDIRLPRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGS 141
            L IR PR+     AGA L L G++ Q+ +RNPL  P ++G TSGA  GA++ +++  G 
Sbjct: 72  WL-IRTPRVLLGALAGAGLALIGSVLQAATRNPLADPHLLGATSGATLGAVI-VVMHVGE 129

Query: 142 GVAVV---FSAIAGGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGS 198
              ++    +A  G +++   V  L+   G +   RL+L G+ V  V+ A+  L L  G 
Sbjct: 130 VFGMLTLPLAAFVGSLVSLCLVLWLASHQGRLDSQRLLLGGVAVSFVMMAIANLSLFLGD 189

Query: 199 LDSAITANLWLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVV 258
             +  +   W+ G L    W  +      VL    L++ L RSL  L  GD+ A  LG+ 
Sbjct: 190 HRANSSVLFWMLGGLGLARWELLAVPFITVLCGWILLQGLGRSLNALMGGDQTAVSLGLQ 249

Query: 259 VEPIRLFMILAAVTLAALATGAAGPIAFIALAAPQLAARLRQTANIPLVS-AGLMGACLL 317
           V  +RL + L A  +  +     G I F+ L  P +A RL  + +  L+  A L+GA L+
Sbjct: 250 VRNMRLLVFLIASLMTGVLVALCGSIGFVGLMVPHMARRLVGSEHRRLLPVATLLGALLM 309

Query: 318 LGADLLTQWMPLALTLPIGRITGLVGGMYLLILLMRSK 355
           +  D++++ +     LPIG  T L+GG++ + ++ R +
Sbjct: 310 VWVDVISRTLIAPEDLPIGITTALLGGLFFIFMMKRGQ 347