Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  142 bits (359), Expect = 1e-38
 Identities = 104/333 (31%), Positives = 164/333 (49%), Gaps = 15/333 (4%)

Query: 37  VALVLSLIVLALMILATCVGKLPISISDVTAILLGE------VTSGFKRQVLLDIRLPRI 90
           V  V +++VLA+MI A  +G+  IS+  V  +L  +      V       ++ + RL R 
Sbjct: 10  VLWVSAVLVLAIMIGAA-IGETSISLQVVFQVLANKLWAASYVLDPIDEGIVWNYRLTRA 68

Query: 91  FTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSG-VAVVFSA 149
             A   GA L + G + QS+ RNPL  P ++G ++GA+TGA+L  IL  G+G +++   A
Sbjct: 69  IVAAACGAGLAICGVVLQSLLRNPLADPYLLGISAGASTGAVLVAILGFGAGAISMSAGA 128

Query: 150 IAGGVMTAIAVYLLSVKS-GTVGRYRLVLTGIGVGSVLTALNGLLLVK-GSLDSAITANL 207
             G V     V LL+  S GT    +++L GI    +  AL   L+ K  S + A     
Sbjct: 129 FVGAVAAFSLVALLAHSSRGTTAAGQIILAGIAGSQLFNALTSFLITKSASSEQARGIMF 188

Query: 208 WLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMI 267
           WL G+L    W  V+  +  VLV L +     R+L     G + A  LG+ V  +++ +I
Sbjct: 189 WLLGNLSGVRWHSVWLAVPTVLVGLLVCLWHRRALDAFTFGSDSAASLGIAVRRVQIILI 248

Query: 268 LAAVTLAALATGAAGPIAFIALAAP---QLAARLRQTANIPLVSAGLMGACLLLGADLLT 324
             A  + A+     G I F+ L  P   ++   +R    +PL  + L GA  L+ AD+L+
Sbjct: 249 TTAALVTAVMVSIVGSIGFVGLVIPHAVRMLVGVRHARLVPL--SALSGALFLIAADILS 306

Query: 325 QWMPLALTLPIGRITGLVGGMYLLILLMRSKNT 357
           + +     LPIG IT L+G     ++L R  +T
Sbjct: 307 RTLIKGQALPIGVITALIGAPVFALILTRGNST 339