Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  183 bits (465), Expect = 5e-51
 Identities = 113/326 (34%), Positives = 191/326 (58%), Gaps = 7/326 (2%)

Query: 36  AVALVLSLIVLALMILAT--CVGKLPISISDVTAILLGEVTSGFKRQVLLDIRLPRIFTA 93
           A+  +LS + L L+++ +   VGK+ +S + + ++  G+  +     ++  +R+PR+  A
Sbjct: 20  ALTRLLSGLALTLLVVLSSLAVGKINLSPATLLSVFTGQADASLVF-IVEQLRMPRLALA 78

Query: 94  LFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGVA--VVFSAIA 151
              GAAL +SG I QSI RNPL SPD++G TSGA+  A+L +  FS +  A  +  +AI+
Sbjct: 79  ALVGAALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYLSFFSAALGAQFLPLAAIS 138

Query: 152 GGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLSG 211
           G  + A+ +YLL+   G     R+VL G+GV ++L A+   +LV   L + ++A +WL+G
Sbjct: 139 GAGLAALVIYLLAWNQGA-SPLRMVLIGVGVSALLAAVTTFILVFSPLTTTLSAYVWLTG 197

Query: 212 SLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAV 271
           S++   W     +   +L+ LPL+  LAR ++M ++ D +A+ +GV V+ +R  ++L +V
Sbjct: 198 SVYGASWPEPRALAGWLLMTLPLLALLARQVRMQQLDDALAQGIGVRVQWLRAGLLLVSV 257

Query: 272 TLAALATGAAGPIAFIALAAPQLAARLRQTANI-PLVSAGLMGACLLLGADLLTQWMPLA 330
            LA LA    G IAF+ L AP +A RL     +   + A L+GA L++ ADL  + + L 
Sbjct: 258 ALAGLAVAWGGAIAFVGLIAPHIAKRLMPPGFVGQALMAALIGANLVMLADLAGRTLFLP 317

Query: 331 LTLPIGRITGLVGGMYLLILLMRSKN 356
           L LP G    ++G  + L LL+  ++
Sbjct: 318 LDLPAGIFVAVLGTPFFLYLLINQRH 343