Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  134 bits (338), Expect = 3e-36
 Identities = 100/317 (31%), Positives = 160/317 (50%), Gaps = 10/317 (3%)

Query: 43  LIVLALMILATCVGKLPISISDVTAILLGEVTSGFKRQVLLDIRLPRIFTALFAGAALGL 102
           LI++A M L+   G   IS +D+   +           VLLD RL R   A+  G++L +
Sbjct: 12  LILVACMGLSLATGATWISPADIVRSVWQPDALSAIEHVLLDTRLTRTLMAVAVGSSLAV 71

Query: 103 SGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGVAV-VFSAIAGGVMTAIAVY 161
           +GA+ Q+++RNPL SP + G  +GA    +    L + S ++  ++ A  G  +    V+
Sbjct: 72  AGALMQALTRNPLASPGLFGINAGATFAIIACSSLLTLSSMSQWLWCAFIGAAVAGTIVW 131

Query: 162 LLSVKS-GTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLSGSLHAREWSH 220
           ++  +  G++   R+VL G  + ++ TA +  LLV    D   T   WL+GSL  RE S 
Sbjct: 132 VIGNRGQGSLNPLRIVLAGAAITALFTAFSQALLVVNQ-DGLDTVLFWLAGSLSERELST 190

Query: 221 VFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAVTLAALATGA 280
             P++  V++ L     LA  + +L  G+ IA  LG     IRL M +  + LA  A   
Sbjct: 191 AAPLLVCVVMGLAGALVLAGQVNVLNTGEAIATALGQRTGLIRLMMSVVIIALAGSAVAL 250

Query: 281 AGPIAFIALAAPQLAARLRQTANIP----LVSAGLMGACLLLGADLLTQWMPLALTLPIG 336
           AG I FI L  P +   +R+T +I     L    ++GA LLL AD L + + +   +P+G
Sbjct: 251 AGSIGFIGLLVPHM---VRKTLSIDHRWLLPGCAVLGATLLLLADTLARVVIVPQEVPVG 307

Query: 337 RITGLVGGMYLLILLMR 353
            +T L G  + + L+ R
Sbjct: 308 VMTALFGAPFFIALVRR 324