Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  132 bits (332), Expect = 1e-35
 Identities = 103/336 (30%), Positives = 172/336 (51%), Gaps = 38/336 (11%)

Query: 45  VLALMILATCVGKLPISISDVTAILLGEVTS-----------GFKRQVLLDIRLPRIFTA 93
           ++A +I+A C+G   +S+  +++  + +V +           G    ++  +R+PR   A
Sbjct: 5   LMAGVIIAACLGLFWVSLFALSSFSIRQVDAWNGLITQGREGGNIAYIVAQLRVPRALCA 64

Query: 94  LFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGVAVVFSAIA-- 151
              GA LG++GA+ Q I+RN L SP + G T+GAA G    + LFS   VA+ F   A  
Sbjct: 65  ALVGACLGVAGALMQGITRNRLASPSLFGVTAGAALG----LALFSTGLVALPFPGGALL 120

Query: 152 ----GGVMTAIAVYLL-SVKSGTVGRYRLVLTGIGVGSVLTALNGL--LLVKGSLDSAIT 204
               GG +  I V+ L    S    + RLVL G+ V ++  AL  L  +LV+    S + 
Sbjct: 121 MTCLGGALAWITVFSLGGAWSPATAQGRLVLAGVAVAALCAALTRLTVILVEAQAQSVLN 180

Query: 205 ANLWLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRL 264
              WL+GSL     + +  +    L+ + L  + A  L ++ +G++ AR LGV +  +R+
Sbjct: 181 ---WLAGSLANVGAAQLQLLWPCTLIGVVLAVACAPRLNLINLGEDAARSLGVRIGALRM 237

Query: 265 FMILAAVTLAALATGAAGPIAFIALAAPQLAARLRQTAN------IPLVSAGLMGACLLL 318
            + + ++ L   +  A GPI F+ L AP +A   RQ         IP +SAGL GA ++L
Sbjct: 238 LVFVVSLLLVGASVCAVGPIGFVGLIAPNIA---RQWLGNDYRWLIP-ISAGL-GAAIVL 292

Query: 319 GADLLTQWMPLALTLPIGRITGLVGGMYLLILLMRS 354
            +DL+++ +   +  P G +T L+G  + L L  R+
Sbjct: 293 ASDLISRAVAFPVETPAGVVTALIGAPFFLFLARRA 328