Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  150 bits (379), Expect = 4e-41
 Identities = 112/321 (34%), Positives = 173/321 (53%), Gaps = 13/321 (4%)

Query: 39  LVLSLIVLALMILATCVGKLPISISDVTAILLGEVTSGFKRQVLLDIRLPRIFTALFAGA 98
           L+++L+ LAL+ L    G + ++   V   L+   +  F+   + + RLPR   A+  G 
Sbjct: 10  LLMTLLALALL-LGLSAGTVWLTPGAVLDHLIAHDSKDFE---VWNHRLPRGLIAIMTGC 65

Query: 99  ALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGV-AVVFSAIAGGVMTA 157
           A GL+GAI Q + RNPL SP+I+G T GA     + II      V A+ F A  GG   A
Sbjct: 66  AFGLAGAIVQGVIRNPLASPEILGVTQGAGLALTIAIIGLPQLPVSALPFVACLGGAAGA 125

Query: 158 I--AVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLSGSLHA 215
           +  A+Y   V+   V   R  L+G+ +   L+++   L++   LD   TA L L+GSL +
Sbjct: 126 LLLALYNTGVQFSGV---RFALSGVAIAVTLSSITEFLILSNPLDIN-TALLALTGSLWS 181

Query: 216 REWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAVTLAA 275
           R W HV  +   +L+L+PL   LA+ L ++ +GDE A+ LG  +   R   + +AV L +
Sbjct: 182 RNWHHVL-LATPLLLLIPLSLLLAKPLNLIGLGDEAAQSLGTGLTRTRWLAMGSAVLLTS 240

Query: 276 LATGAAGPIAFIALAAPQLAARLRQTANIPLVSAGL-MGACLLLGADLLTQWMPLALTLP 334
           L  G  GP++F+ L AP +A RL    +  L+ A + +GA LL+ AD L + +     +P
Sbjct: 241 LGVGIIGPVSFVGLVAPHMARRLVGGHHQYLLPASMVLGALLLVLADTLGRTLIAPSEIP 300

Query: 335 IGRITGLVGGMYLLILLMRSK 355
            G +T ++G  Y L LL R K
Sbjct: 301 AGILTAVIGAPYFLWLLARFK 321