Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Rahnella sp. WP5

 Score =  138 bits (347), Expect = 5e-37
 Identities = 100/331 (30%), Positives = 170/331 (51%), Gaps = 22/331 (6%)

Query: 30  VERRNIA--VALVLSLIVLALMILATCVGKLPISISDVTAILLGEVTSGFKRQVLLDIRL 87
           VER+++   ++L L++++L LM+ A   G+     S  T         G   Q LL  RL
Sbjct: 344 VERQHLVRWMSLALAVLLLGLMV-ALMAGRNATGWSWST---------GADLQALLPWRL 393

Query: 88  PRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGVAVVF 147
           PR+  AL AG  L  SG + Q ++ N + SP+++G +SGAATG +  +++F   G A V+
Sbjct: 394 PRVMAALAAGIMLASSGVLIQKLTGNAMASPEVLGISSGAATGVV--VMMFIVPGDAFVW 451

Query: 148 SAIAGGVMTAIAVYLLSVKSG--TVGRYRLVLTGIGVGSVLTALNGLLLVKGS--LDSAI 203
              AG    A+ + ++ V SG  +    R++LTGI + +  T L  LLL  G   +   +
Sbjct: 452 LLPAGSAGAALTLLVIMVASGLRSFSAERMLLTGIALSTAFTTLMTLLLASGDPRMGGLL 511

Query: 204 TANLWLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIR 263
           T   WLSGS ++      +  +    VL+ L+    R + +L +G   A+ +G+ + P R
Sbjct: 512 T---WLSGSTYSVSAEAAWRTLILAGVLMVLVPFCRRWINILPLGSVTAKSVGLALTPTR 568

Query: 264 LFMILAAVTLAALATGAAGPIAFIALAAPQLAARLRQTANIP-LVSAGLMGACLLLGADL 322
           L ++L A  + A AT   GP++F+ L AP +A  +     +P  + A ++G  L++ AD 
Sbjct: 569 LAILLLAAVMTAAATLTVGPLSFVGLMAPHMARMMGFRRAVPQWMVASILGGLLMVFADW 628

Query: 323 LTQWMPLALTLPIGRITGLVGGMYLLILLMR 353
             + +     +P G +   +G  Y + LL +
Sbjct: 629 CGRMIIFPDQIPAGLLATFIGAPYFIYLLRK 659



 Score =  123 bits (308), Expect = 2e-32
 Identities = 104/338 (30%), Positives = 168/338 (49%), Gaps = 16/338 (4%)

Query: 30  VERRNIAVALVLSLIVLALMILATCVGKL--PISISDVTAILLGEVTSGFKRQVLLDIRL 87
           + RR+ +V+L L LI+LAL   A  +  L   +  +     L        ++ +     L
Sbjct: 1   MNRRSFSVSLTL-LILLALAAGALSLYNLNQQLPYAQWRGALWQPDIDNVQQMLFHYSLL 59

Query: 88  PRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQII-LFSGSGVAVV 146
           PR+  AL AGA LGL G +FQ + RNPL  P  +G ++GA  G  +  +    G  +   
Sbjct: 60  PRVAVALLAGAGLGLVGLLFQQVLRNPLAEPATLGVSAGAQLGLTVATLWALPGGMITQQ 119

Query: 147 FSAIAGGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITAN 206
           F+A+AG V+    V+ ++     +    L+L G+ +G    A+NGL+ +  +  +  +  
Sbjct: 120 FAAMAGAVVIGALVFGIAWGK-RMSPVTLILAGLVLGLYCGAVNGLIGIF-NYQNLQSLY 177

Query: 207 LWLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFM 266
           +W SG+L+ ++W     ++  V+++  L   L R + +L + D IA+ LG+ +   RL +
Sbjct: 178 MWSSGALNQQDWDIANFLLPRVIIVWLLAFLLQRPMTLLGLDDGIAKNLGLGLSAARLAV 237

Query: 267 ILAAVTLAALATGAAGPIAFIALAAPQLAARL-RQTANIPLVSAGLMGACLLLGAD---- 321
           +  A+ ++A    A G I FI L AP LA  L  +     L+ A ++GA LL   D    
Sbjct: 238 LTLAILMSAQLVNAVGIIGFIGLFAPLLAKMLGARRLAARLIIAPVIGALLLWLTDQVMQ 297

Query: 322 -LLTQWMPLALTLPIGRITGLVGGMYLLILLMRSKNTV 358
            L T WM     +P G  T LVG   LL LL R +N +
Sbjct: 298 TLTTFWM----EIPTGAATALVGAPLLLWLLPRLRNNM 331