Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., iron ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  127 bits (318), Expect = 6e-34
 Identities = 106/343 (30%), Positives = 165/343 (48%), Gaps = 30/343 (8%)

Query: 35  IAVALVLSLIVLALMILATCVGKLPISISDVTAILLGEVTSGF----------------- 77
           +  ALV   IV AL+ L+   G+  +  + V  ILL E+ + F                 
Sbjct: 20  VVAALVFLPIVTALLCLSA--GRYQVPTTHVFGILLDELFARFGLNAADWLPAGWGTASW 77

Query: 78  ---KRQVLLDIRLPRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQ 134
              +R V+  +RLPR+  A  AGA L LSGA+ Q + RNPL  P  IG  SGA+ G ++ 
Sbjct: 78  TPTERIVVTTVRLPRVLMAGIAGAGLALSGAVLQGMFRNPLVGPQTIGAASGASLGGVVA 137

Query: 135 IILFSGSGVAVVFSAIAGGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLL 194
           I+LF G G+ V   A AG  +   AV ++    G      LVL G+ +G+  +AL G + 
Sbjct: 138 ILLF-GFGLPVHLGAFAGAAIALAAVLIVHRGDGVSPVLTLVLAGVVIGAFCSALVGFVT 196

Query: 195 VKGSLDSAITANL-WLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIAR 253
                +  +   + WL GS  A  W ++  +    ++   ++ ++   + +L +GDE AR
Sbjct: 197 FIADPEVKLPGIVFWLLGSFAASSWPNLMLLATCTILGGGVMLAMRWRVNVLSLGDEEAR 256

Query: 254 QLGVVVEPIRLFMILAAVTLAALATGAA--GPIAFIALAAPQLAARLRQTANIPLVS-AG 310
            LG  VEP R  +IL   T  A++   A  G I ++ L  P L   +    +  L+  + 
Sbjct: 257 TLG--VEPGRDRVILLTATCLAISAQVAVSGTIGWVGLVIPNLVRMVVGADHRRLLPVSA 314

Query: 311 LMGACLLLGADLLTQWMPLALTLPIGRITGLVGGMYLLILLMR 353
           + GA  L+ AD L + +  A  +P+G +T +VG      LL R
Sbjct: 315 VAGAAFLMAADTLARDLS-AAEIPVGIVTAIVGTPVFAWLLRR 356