Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., transport system permease protein (RefSeq) from Shewanella loihica PV-4

 Score =  154 bits (388), Expect = 4e-42
 Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 10/320 (3%)

Query: 41  LSLIVLALMILATCVGKLPISISDVTAILLGEVTS----GFKRQVLLDIRLPRIFTALFA 96
           L L+ LA  +LA   G   I +++V  +LL +++     G   ++L+++RLPRI  A  A
Sbjct: 23  LGLLTLATPVLAVSFGAAQIGVAEVLEVLLAKLSGADPGGVTARILIELRLPRILLAFIA 82

Query: 97  GAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSG-----VAVVFSAIA 151
           G  L L+GA+ Q+++RNPL  P + G +SGA+ GA++ I L  G G     V +   A  
Sbjct: 83  GFGLALAGAVLQTVTRNPLADPYLFGISSGASLGAVVVITLLGGVGGALASVGLPLGAFI 142

Query: 152 GGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLSG 211
           G  +  + V  L  +       R++L+G+ +  +  AL  L+L      SA +   W  G
Sbjct: 143 GASLAVLMVLALCGRDLNTQIERMLLSGVAISFLFGALASLMLYFSGPQSAASVLFWSLG 202

Query: 212 SLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAV 271
           S     W  ++     VL    ++  L R +  ++ GDE A  LG+ V+ +RL  +L   
Sbjct: 203 SFAKASWQMLWLPWLLVLAASAILLLLKRQILAIQAGDETAHTLGIRVQRLRLVSLLLCS 262

Query: 272 TLAALATGAAGPIAFIALAAPQLAARLRQTANIPLVSAGLMGACLLLGADLLTQWMPLAL 331
            + A+     G I F+ L  P +  RL       L+   L+G   ++  D+L + +    
Sbjct: 263 LITAVLVANCGGIGFVGLMVPHM-VRLLLPGRFALLLTALVGGLFMIWVDVLARCLLSYQ 321

Query: 332 TLPIGRITGLVGGMYLLILL 351
            LP+G IT ++G ++ L +L
Sbjct: 322 ELPVGIITAVIGSLFFLFIL 341